Gene TC0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0539 
Symbol 
ID1245899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp649474 
End bp650280 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content40% 
IMG OID637061345 
ProductN-acetylmuramoyl-L-alanine amidase, putative 
Protein accessionNP_296916 
Protein GI15835157 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000536287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGGAA GGGACATGAG GTATATCAGA TCTTCAAACA TCAGACGATT GTCTTTGATG 
ATCGAGAGGT TGTGTGTGAA GCTTTGGCCT CGATTTATTA ATTCAAAATT CTTGTTTTTA
CTGCTTGCTT TGGGTGTCGG TCCGGATAAG TGTTTTTCGG ATGCTGTAAA TACTCCTGTT
GTTCCCAAGG TAAGTCGAAA TGAGCTTATT GTGATAGATC CTGGCCATGG TGGTAAGGAT
GAAGGAACTG CGGATAAGGA GCTGCGATAT AAAGAGAAGT CTTTAGCTTT ATCAATAGCT
TTAAGTGTGC AGGGGTATCT ACGCCGAATG GGATATAAGA CGATCATGAC AAGATCCACA
GATGTTTATG TGGATTTGAA TAAGCGAGCG GCGATAGCAA ACCAAAACAA AGCAGATGTT
TTTGTTAGTA TCCATTGTAA TTACTCCTCT AATACCTCTG CTTTAGGTAC AGAGGTCTAT
TTTTATAATG ATAAAAATGT ATTGAGAACT AAAAAATCAG AGAACCTTGG GAAATCGATT
CTAGCTTTCA TGCAAAAGAA TGGGGCTTTG CGGGAGCGTA AGGTTAAAGA GGGTAATTTT
GCAGTTATCC GAGAAACCTC CATGCCTGCG GTCCTGGTAG AAACAGGGTT CCTCTCTAAT
CCAAAAGAGC GAGCAGCTCT TTTAGACTCC CGTTATCGTT CGCATTTAGC TAAAGGTATT
TCTGAAGGAA TACATGCCTT TATTCTTAAT CGACAGATTA AAAAGACTAC AGCGGGGAAT
TCGGGAGTAA AAAAAGTGTA TAAATAA
 
Protein sequence
MQGRDMRYIR SSNIRRLSLM IERLCVKLWP RFINSKFLFL LLALGVGPDK CFSDAVNTPV 
VPKVSRNELI VIDPGHGGKD EGTADKELRY KEKSLALSIA LSVQGYLRRM GYKTIMTRST
DVYVDLNKRA AIANQNKADV FVSIHCNYSS NTSALGTEVY FYNDKNVLRT KKSENLGKSI
LAFMQKNGAL RERKVKEGNF AVIRETSMPA VLVETGFLSN PKERAALLDS RYRSHLAKGI
SEGIHAFILN RQIKKTTAGN SGVKKVYK