| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0373 |
|---|
| Symbol | rpsA |
|---|
| ID | 1245725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | - |
|---|
| Start bp | 435054 |
|---|
| End bp | 436766 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637061173 |
|---|
| Product | 30S ribosomal protein S1 |
|---|
| Protein accession | NP_296751 |
|---|
| Protein GI | 161579046 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0539] Ribosomal protein S1 |
|---|
| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0107492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAC AAGCTGATTA TACTTGGGGA GCAAAAAAGA ATCTCGACAC GATAGCTTGC
TTACCAGAAG ACGTTAAACA ATTTAAAGAC CTTCTTTACG CGATGCATGG CTTCACCGCG
ACAGAAGAAG AACCCACTAG CGAAGTACAG CCTGGTGCGA TCCTAAAAGG TACAGTTGTC
GACATAAGCA AAGATTTTGT CGTGGTTGAC GTTGGATTAA AATCTGAAGG AGTCATCCCG
ATGTCGGAGT TTATTGACTC TTCAGAAGGT TTGTCCGTCG GAGCTGAGGT TGAAGTTTAT
TTGGACCAAA CTGAAGACGA AGAAGGAAAG GTCGTCCTGT CCAGAGAAAA GGCAACAAGA
CAACGTCAAT GGGAATACAT TCTTGCTCAT TGTGAAGAAG GCTCGATTGT TAAAGGACAA
ATCACTCGAA AAGTCAAAGG TGGCTTAATT GTTGATATTG GTATGGAAGC TTTCCTTCCA
GGGTCTCAAA TCGACAATAA AAAAATTAAA AACTTGGATG ACTACGTAGG GAAAGTTTGT
GAATTCAAGA TTCTCAAAAT TAACGTAGAT CGCAGAAATG TTGTTGTGTC TAGAAGAGAA
CTTCTGGAAG CTGAACGCAT TTCTAAGAAA GCTGAGTTGA TTGAGCAAAT CACAATCGGA
GAACGTCGTA AAGGTATCGT CAAAAACATT ACTGACTTTG GAGTTTTCTT AGATCTCGAT
GGTATCGATG GGCTGCTTCA TATCACAGAT ATGACATGGA AACGTATCCG TCACCCTTCT
GAAATGGTTG AACTCAACCA AGAATTGGAA GTAATCATCC TCAGCGTGGA TAAAGAGAAA
GGTCGTGTAG CTCTTGGTCT GAAGCAAAAA GAACACAATC CTTGGGAAGA TATCGAGAAG
AAATACCCTC CAGGAAAACG TGTTCGTGGA AAAATTGTTA AACTTCTCCC TTATGGAGCA
TTTATTGAAA TTGAGGAAGG TATTGAAGGC CTCATTCACG TTTCAGAGAT GTCTTGGGTT
AAAAACATCG TTGATCCTAA CGAAGTTGTA AATAAAGGTG ATGAGGTCGA AGTAGTCGTT
CTCTCTATTC AAAAAGATGA AGGGAAAATT TCTCTCGGCT TGAAACAAAC AGAACATAAT
CCTTGGGATA ATATTGAAGA AAAATATCCT ATTGGATTGC GTGTGACAGC AGAAATTAAA
AATCTAACAA ATTATGGAGC TTTCGTTGAA TTAGAGCCCG GAATCGAAGG ATTAATTCAC
ATTTCTGATA TGAGTTGGAT TAAAAAGGTT TCTCATCCTT CCGAACTTTT CAAAAAAGGA
AATACTGTCG AGGCTGTTAT TTTGTCCGTA GACAAGGAAA GTAAAAAAAT CACTTTAGGC
GTAAAACAAT TGACTCCTAA TCCATGGGAT GAGATTGAAG CTATGTTCCC TGTCGGAAGC
GATATCTCCG GTATAGTAAC TAAAATTACA GCTTTCGGAG CTTTCGTTGA ATTGCAAAAT
GGTATCGAAG GACTGATTCA CGTATCCAAA CTTTCTGATA AACCTTTTGC TAAAATTGAA
GATATTCTCT CTATCGGAGA CAAGGTTTCT GCTAAGGTTA TCAAGCTAGA TCCTGATCAC
AAGAAAGTTT CTCTTTCCAT TAAAGAGTTC CTTGCTCATG GAGGACATGC TGGTCAAGAT
GCAGAAGAAG AAACATCTTC TAACAGAGAC TAG
|
|---|
| Protein sequence | MPKQADYTWG AKKNLDTIAC LPEDVKQFKD LLYAMHGFTA TEEEPTSEVQ PGAILKGTVV
DISKDFVVVD VGLKSEGVIP MSEFIDSSEG LSVGAEVEVY LDQTEDEEGK VVLSREKATR
QRQWEYILAH CEEGSIVKGQ ITRKVKGGLI VDIGMEAFLP GSQIDNKKIK NLDDYVGKVC
EFKILKINVD RRNVVVSRRE LLEAERISKK AELIEQITIG ERRKGIVKNI TDFGVFLDLD
GIDGLLHITD MTWKRIRHPS EMVELNQELE VIILSVDKEK GRVALGLKQK EHNPWEDIEK
KYPPGKRVRG KIVKLLPYGA FIEIEEGIEG LIHVSEMSWV KNIVDPNEVV NKGDEVEVVV
LSIQKDEGKI SLGLKQTEHN PWDNIEEKYP IGLRVTAEIK NLTNYGAFVE LEPGIEGLIH
ISDMSWIKKV SHPSELFKKG NTVEAVILSV DKESKKITLG VKQLTPNPWD EIEAMFPVGS
DISGIVTKIT AFGAFVELQN GIEGLIHVSK LSDKPFAKIE DILSIGDKVS AKVIKLDPDH
KKVSLSIKEF LAHGGHAGQD AEEETSSNRD
|
|---|
| |