Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0093 |
Symbol | |
ID | 1245623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 111746 |
End bp | 112528 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637060887 |
Product | NifU-related protein |
Protein accession | NP_296477 |
Protein GI | 15834718 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.467374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATTC CATTTTATCC TTTCTCTTTA TGGAGCAGCT TCCCCGCAAA ATCATTGCGC TTATTCTTTC AGCCTAAACA CGGGGGACTC TTATCTCAGG AGCAAGAAGA TGAACACTCC CAACTTATCA TAGGCAAGCA GGGTCACTTA CTTATGGGGA ATACCCTGAT TTTTTACTGG CTTGTCAACA AAACAAATGG GATCATTCAA GAAGCTAAAT TTCAATTCTT CGGCCATCCC TATCTACTTG TTCTTGCTGA AGCCACCTGT TCATTAGTGA TTGGAAAGAC TTTTGCCGAA GCCTACAAAA TGACTATAAA TGACCTTGAG CAGGAAGTCC ACGGACGTAC CCAGCCCTCT ATTTTCCGTG AAGACCTATC CCCCCTTTAC CACTTGGTGA TGGATGCTCT TGATATTGCG ATTGAACAAT GTGTCGATAT TCCCGTAAAT GACAGCCCTT TCCCCTTCAA AGATGCCCTC CTACAATTAA ACGATGGGGA TCCCTATTCT AAAGAAGAGT GGGAGAATCT TTCCTACGAT GAACAACTTT CTACATTAAA CATCATGATG AAAGAAAAGA TAGCTCCCCT GGTTGCTATG GATGAAGGCT CTGTACGTAT CGTTCATTTC GAAGGACTTA CTGTAACTAT TGCCTACTCT GGAAATTGCT CCTCCTGCTT ATCTGCTGTA GGATCCACCC TAAATTCAAT AGGGCAGCTC TTCCGAGCAC ACGTTTACCC TTTATTAGAA ATAAAAGTAG ATGAACAGTC TCTTTTATTT TAA
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Protein sequence | MIIPFYPFSL WSSFPAKSLR LFFQPKHGGL LSQEQEDEHS QLIIGKQGHL LMGNTLIFYW LVNKTNGIIQ EAKFQFFGHP YLLVLAEATC SLVIGKTFAE AYKMTINDLE QEVHGRTQPS IFREDLSPLY HLVMDALDIA IEQCVDIPVN DSPFPFKDAL LQLNDGDPYS KEEWENLSYD EQLSTLNIMM KEKIAPLVAM DEGSVRIVHF EGLTVTIAYS GNCSSCLSAV GSTLNSIGQL FRAHVYPLLE IKVDEQSLLF
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