Gene TC0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0086 
Symbol 
ID1245616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp104689 
End bp105711 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content43% 
IMG OID637060880 
Productmajor outer membrane protein, putative 
Protein accessionNP_296470 
Protein GI15834711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.994588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA AGCTAGTGAA CTCTCTCCGT TTAACTTTCC TATCTTTTTT AGGGATCGTA 
TCTACATCAT TAGACGCTAT GCCTGCAGGG AATCCGGCGT TCCCCGTCAT TCCAGGAATC
AACGTTGAAC AGAAAAGCGC CTGTGCTTTT GATCTATGTA ATTCCTATGA TGTGTTATCT
GCTCTTTCCG GGAACTTGAA ACTCTGCTTC TGTGGGGATT ATATCTTCTC AGAAGAAGCT
CAAGTAAAAG ATGTTCCGGT TGTTACCTCT GTAACCACAA GTGGAGTAGG GCCTTCTCCG
ACTATTACTT CAACTACTAA GAATCGCAAT TTTGATCTTG TTGACTGTTC TCTTAGCGCT
AACTGTGTAG CTGCTGCGTT CTCGCTTCCT GATCGAACAA TGAGTGCGAT TCCTCTCTTT
GATGCCAGCT TTGAAGTAAA AATCGGTGGT CTAAAACAAT ACTACCGTCT TCCTATGAAT
GCTTATAGAG ATTTTACTTC CGATCCCTTG AATTCCGAAT CAGAAGTAAC GGATGGGCTT
ATTGAAGTGC AGTCCAACTA TGGATTTGTT TGGGATGTTA GCTTGAAAAA AGTTCTTTGG
AAAGATGGGG TTTCATTCGT TGGTGTAGGC GTAGACTATC GCCATGCGTC CTGTCCTATT
GACTATATCA TTGCAAATAG CCAAGCCAAC CCTGAGGTAT TCATTGCAGA CTCTGACGGA
AAACTGAGTC TCAAAGAATG GAGCGTATGC CTAGGTCTTA CTACCTATGT GAACGATTAT
ATCCTCCCCT ATGTTGCTTT CTCCGTAGGG AATGTTTCTC GTGAAGCTCC AGACAATAGC
TTCAAAAAAC TCGAAGAGCG ATTCACTAAC CTCAAGTTCA AGGTTCGTAA AATTACCAGC
TCTCACCGTG GGAATATCTG CATCGGAGCT ACGAACTATA TTGCCGACAA CTTTTTCTAC
AATGTAGAAG GAAGATGGGG CAGCCAGAGA GCCGTCAATA TCTCTGGAGG ATTCCAATTC
TAA
 
Protein sequence
MSSKLVNSLR LTFLSFLGIV STSLDAMPAG NPAFPVIPGI NVEQKSACAF DLCNSYDVLS 
ALSGNLKLCF CGDYIFSEEA QVKDVPVVTS VTTSGVGPSP TITSTTKNRN FDLVDCSLSA
NCVAAAFSLP DRTMSAIPLF DASFEVKIGG LKQYYRLPMN AYRDFTSDPL NSESEVTDGL
IEVQSNYGFV WDVSLKKVLW KDGVSFVGVG VDYRHASCPI DYIIANSQAN PEVFIADSDG
KLSLKEWSVC LGLTTYVNDY ILPYVAFSVG NVSREAPDNS FKKLEERFTN LKFKVRKITS
SHRGNICIGA TNYIADNFFY NVEGRWGSQR AVNISGGFQF