Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0072 |
Symbol | psd |
ID | 1245601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | + |
Start bp | 81897 |
End bp | 82802 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637060865 |
Product | phosphatidylserine decarboxylase |
Protein accession | NP_296456 |
Protein GI | 15834697 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCGC AAGAATTTTT ATATGTGAAT CGCGAAACAG GTGCTGTGGA AAAAGAGCCA GTCTGTTGTT CTTTTGCGAT TAAGTTTTTT CTTGAAACCC GATTAGGGAG GGGGGTGTAT TCTTTTTTAT GTAAGAATAG CTTGTTTTCT CGAATCGTGG GCAGGTTTCA ACGACTGCGA ATGACAAGGC GCTTTATTAG GCCTTTTGTT GAAAAATATC GTATTTGCGA AGACGAGGCA TTACGTCCCC TTTGTGATTT CACATCTTTT AACGATTTTT TTATACGGAA ACTTAAGCCA GAAGCTCGGC CTATTTGTGG AGGGAGTGAA ATATGTGTCA CTCCTGCGGA CGGTGCCTAT CTGGTGTTTC CTTCTATAAA GGATGTTTCT TTGTTTTCTG TTAAAAACCA ACTTTTTTCT TTGAACTCTT TGTTAGAAGA TCAGCAATTA GCTTCCGAAT ATGCAGAAGG AAGTATGGCT ATTGCTAGGT TGGCACCTTT TGATTACCAC CGATTTCATT TTCCAGTGGA AGGTATTGCA GGTACCCCCA GACTGATTAA TGGGTATCTC TTTTCCGTTC ACCCGCTGAT GCTTAAAAGG AATTTAAAAG TGTTCGCCGA AAATAAGCGG GAGATAACCG TTATAGAGTC TAAGGAGTTT GGCAAAGTTG TCTATATAGA AATAGGGGCT TTAAATGTCG GCTCCATCCA TCAAACTTTT GCTCCTGGTA GCTATGTAGG GAAGGGAGCA GAAAAAGGTT TCTTTGCTTT TGGGGGATCG ACAGTTGTGT TGTTGTTTGA GCCTCAGCGT ATTATTTTTG ATGCGGACTT GGTGCACCAT TCTGCCCAAG GCTTAGAAAC TCGATGTCGA ATGGGACAAT CTTTAGGAAA ACGTTTCTCT TCATAA
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Protein sequence | MESQEFLYVN RETGAVEKEP VCCSFAIKFF LETRLGRGVY SFLCKNSLFS RIVGRFQRLR MTRRFIRPFV EKYRICEDEA LRPLCDFTSF NDFFIRKLKP EARPICGGSE ICVTPADGAY LVFPSIKDVS LFSVKNQLFS LNSLLEDQQL ASEYAEGSMA IARLAPFDYH RFHFPVEGIA GTPRLINGYL FSVHPLMLKR NLKVFAENKR EITVIESKEF GKVVYIEIGA LNVGSIHQTF APGSYVGKGA EKGFFAFGGS TVVLLFEPQR IIFDADLVHH SAQGLETRCR MGQSLGKRFS S
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