| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0070 |
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| Symbol | trmE |
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| ID | 1245599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 80287 |
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| End bp | 81621 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637060863 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | NP_296454 |
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| Protein GI | 15834695 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.868206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCAAA ATGATACAAT CGCTGCCATT GCAACTCCTC CGGGAGAAGG GAGTGTCGCC
ATTGTGCGCG TCTCTGGCCC TGACGCTATT TCTATTTCTA ATCGTATTTT TTCTGGCAAT
ATTGCAGGCT ATGCCTCGCA TACAGCCCAC CTTGGCACTG TAGTTCATAA TGAAGTTTGT
ATTGATCAAG CTTTAGTGTT GATTATGCGA ACCCCCCGTT CTTTTACAGG TGAAGACATT
GTAGAATTCC AATGCCATGG AGGATACTTC GCTTGCTCTC AAATTTTGAA TGCCTTGTTG
GCGGAAGGGG CTCGCGCAGC ACTTCCCGGA GAATTTTCAC AACGAGCTTT TTTGAATGGG
AAAATCGACC TAATTCAAGC AGAGGCTATA CAACAGCTCA TTTCAGCTGA AAATATTGAT
GCTTTTCATA TTGCCCAAAA TCAATTTCAA GGGCATACCT CACAAGCCAT TTCCTCGATT
TCCTCCTTAA TCATAGAAGC TTTAGCCTAC ATAGAAGTTT TAGCAGACTT CCCTGAAGAA
GATATAGAAA CGGAACGTTC CCTTCCTGTG CAAAAAATCA CAGAAGCTCT CACTATCACA
CAAGAGCTTC TTTCTAGCTT TGATGAGGGA CAACGTCTTG CTCAAGGGAC AAGCATTGTT
TTAGCAGGGC TTCCCAATGC AGGGAAATCT TCTATACTCA ATGCTCTTAC TCAAAAAAAT
CGAGCAATTG TTACCGACAT ACCAGGAACA ACTCGCGATA TTTTAGAAGA AAACTGGGTT
TTGCAAGGGA AGAATCTTCG TCTGATTGAT TCTGCAGGTA TTCGAGAAAC CGAAAACATT
GTTGAAAAAG AAGGAATAGA ACGCGCTCGG CAGGCCATGA GTCAAGCAGA GGGCATCCTC
TGGGTTATGG ATGCCTCTCA ACCTGTTCCA GAATTTCCTG CCATCCTATA CCAAAAGCCG
ACTATTTTAC TTTGGAATAA ATGCGATGTT GCATCTCCCC CTCAACTAGA GGTCCCTTTT
CAGCAAATTT TTGTATCTGC TAAAACTGGA AAAGGGTTTT CGGAATTGCG ACAAGCATTA
AACAAATGGC TCCACACCAC ACAATTAGGA AAATCTTCTA AAGTCTTTTT AGTTTCTGCA
AGGCATCACA GCTTGCTGCA TGCTGTTCAT ACATGCTTAA CAGATGCGTT AACAGGATTC
CAAGAACATC TCCCTAATGA ATGCCTTGCA TTAGATCTCA GACAAGCTTT ACATTCTATA
GGGAATCTAT CTGGATCTGA AGTCACTGAA AATGTTTTAG GAGAAATTTT CAGTAAATTT
TGTATAGGGA AATAG
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| Protein sequence | MLQNDTIAAI ATPPGEGSVA IVRVSGPDAI SISNRIFSGN IAGYASHTAH LGTVVHNEVC
IDQALVLIMR TPRSFTGEDI VEFQCHGGYF ACSQILNALL AEGARAALPG EFSQRAFLNG
KIDLIQAEAI QQLISAENID AFHIAQNQFQ GHTSQAISSI SSLIIEALAY IEVLADFPEE
DIETERSLPV QKITEALTIT QELLSSFDEG QRLAQGTSIV LAGLPNAGKS SILNALTQKN
RAIVTDIPGT TRDILEENWV LQGKNLRLID SAGIRETENI VEKEGIERAR QAMSQAEGIL
WVMDASQPVP EFPAILYQKP TILLWNKCDV ASPPQLEVPF QQIFVSAKTG KGFSELRQAL
NKWLHTTQLG KSSKVFLVSA RHHSLLHAVH TCLTDALTGF QEHLPNECLA LDLRQALHSI
GNLSGSEVTE NVLGEIFSKF CIGK
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