Gene TC0039 details

Gene Information

• Locus tag: TC0039
• ID: 1245564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 44161
• End bp: 44841
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637060828
• Product: hypothetical protein
• Protein accession: NP_296423
• Protein GI: 15834664

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAGTGGT GCATGATAGA TCCTCTGACA CTTTTTCCAA ATTTTGATGG AGATAAGGAG 
AGTGCTGTGG TTGACAAGCC TTCAGCATCT CCTATGTCTA GCGAATTGAA TAAGAATGTT 
GCTTTATTTT CGCTAGGAGG AGGAAATGTA GCAATGGATT CGGGAGTTTC TGCAGAGAAA 
CCATCTTTAA TGGCAATGAT GCAGGATAAA AATTCGCAGC TGATCGATCC AGAATTAGAA 
GAAGCTCTTA ATTCCGAAGA GTTGCAAGAA CAAATTAATT TATTGAAAAG TCGTTTGTGG 
GATGCGCAAA CACGAATAGA GAATCAAGAT CTAGATAAGC TTACCTCAGA GCATATCGAT 
GCTTTAGGGA CTATTATTGA TTTGATTCAT GGAGATTTTC AATCGATTGC TGAACATACA 
CAACAAAGTA TGGATCAGGC TAACAATAAA GAGAAATCCA TTACGCGTAA GGTTGTAGAT 
TGGGTTTCCT CAGGAGAAGA AATTCTGAAT CGGGCTTTAT TGTATTTGTG TTCTCGTAAT 
GGAGAAGGAG AATCGCTCGC GGATTTCTTA AAAGTTCAGT ATGCTGTTCA AAGAGCTACA 
CAGCGATCCG AGTTATTTGC CAGTATTTTA GGAGCCTCGG TAAGTAGTAT AAAAACGATC 
ATGACAACAC AATTAGGTTA A 

 

Protein sequence

MEWCMIDPLT LFPNFDGDKE SAVVDKPSAS PMSSELNKNV ALFSLGGGNV AMDSGVSAEK 
PSLMAMMQDK NSQLIDPELE EALNSEELQE QINLLKSRLW DAQTRIENQD LDKLTSEHID 
ALGTIIDLIH GDFQSIAEHT QQSMDQANNK EKSITRKVVD WVSSGEEILN RALLYLCSRN 
GEGESLADFL KVQYAVQRAT QRSELFASIL GASVSSIKTI MTTQLG