Gene TC0023 details

Gene Information

• Locus tag: TC0023
• ID: 1245547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 30323
• End bp: 31042
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637060812
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_296407
• Protein GI: 15834648
• COG category: [R] General function prediction only
• COG ID: [COG1137] ABC-type (unclassified) transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTAC TGTCCGTTTG CAACCTAATC AAAAGATACA ATAAAAAACC GGTTACTAAC 
GATGTGTCCT TCCAAGTGAA TGCAGGAGAA ATCGTTGGGT TATTAGGTCC TAACGGAGCA 
GGGAAAACAA CAGCTTTTTA TCAAACTGTA GGGTTAATCC GTCCAGATTC TGGTAAAATT 
TTATTCAAAA ACACAGACAT TACTAAGAAG CCCATGGACT ATCGAGCACG TCTCGGTATT 
GGCTACCTAG CGCAAGAGCC CACTATTTTT AAAGAGCTTA CTGTTAAAGA AAACCTGATC 
TGTGTTCTTG AAATTATCTA CAAAACACGA AAAGAGCAGA CCCATCTACT AAACGCCCTA 
ATAGATGATT TGCAATTGAC CACTAGCTTA CATAAAAAAG CAGGTTCTTT GTCCGGAGGA 
GAACGTCGCC GACTGGAAAT TGCTTGCGTT CTCGCTTTAA ATCCTAGTGT TCTTTTACTG 
GACGAGCCCT TTGCTAATGT GGATCCCCTT GTGATTCAAA ATGTCAAATA CCTGATTAAA 
ATTTTAGCAA GCCGAGGCAT TGGCATTTTA ATCACTGACC ATAATGCTAA AGAACTTTTA 
TCCATTGCTG ATCGTTGCTA CCTGATCATT GATGGCAAAA TCTTCTTCGA AGGATCTTCC 
GCACAAATGA TCGCAAATCC TATGGTAAGA CAGCACTACT TAGGGGACTC TTTCTCTTAA 

 

Protein sequence

MSVLSVCNLI KRYNKKPVTN DVSFQVNAGE IVGLLGPNGA GKTTAFYQTV GLIRPDSGKI 
LFKNTDITKK PMDYRARLGI GYLAQEPTIF KELTVKENLI CVLEIIYKTR KEQTHLLNAL 
IDDLQLTTSL HKKAGSLSGG ERRRLEIACV LALNPSVLLL DEPFANVDPL VIQNVKYLIK 
ILASRGIGIL ITDHNAKELL SIADRCYLII DGKIFFEGSS AQMIANPMVR QHYLGDSFS