Gene TC0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0020 
Symbol 
ID1245544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp26684 
End bp28513 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content38% 
IMG OID637060809 
Producthypothetical protein 
Protein accessionNP_296404 
Protein GI15834645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTCGCG TTTTTTTATT AGTGGGTTTT CTCCTTTCTT GTTTCTCCGC AGGAAGCAAG 
TTGTATCTAT TTTTTTCTTC TTGGGAGACT ACTCCAGAGC AATATGATGG GAAACATCAA
GCTGTTGCAC GATTAAGAGA AAAAAGTACT TTGTCAGAAG GGCTTCCCAT CGAACAAGAG
CAAATGTATT TACTCTGTTG CCAAGGGTTT ACTTTACAAA CACAAAGAAA ATTTAAGGAA
TCGGAAGAAA TTTTCTCTCG TATTTACAAA AAGAAAACCT CTTCACCCTT TTTTTTAAAG
CGAGAGCTAT TAGAGGGGCG TATCATTAAC GCCTATTTTT TGGATAACAT TCCATTAATG
GCAGGCTATA TTGCGGAGTT AGAACAAGAA GCTGGATCGG AAGCACATAT TTGTTTGTTC
AAAGCTTTAC ATGCCTATCG TGAAAAAAAA TATAACGTAG CAATTGATGA GCTTTCTCAC
TGGTTTGAAC ACATAGAAAA GACCAAGCCT TTGTGTTTGG ATACGAATAT CTATGAGTTA
TTCCCTTCCT ATGTTCTGGA GGATATTGCA GCAGAAAGTC TGATTGGTTC CGGTCGGTAT
GTAGAAGGGC GGATTGTTCT TAACAGAATT TTCCACAAGA TCATGTCTCG GGAATATGCT
TGGTCTGTAG ATATGTACAA CCGGTTAGTA CTGATGTTGG GTCAGAGCTA CCTTCTGGAG
TTGAAAGAAG GTGTGCGTAG CGATTTGTTA CCTGAATATT ATAAAACCAT GGTTTTCTAT
CAGAAGCAGA TGCGGGGATT TGATGCTGTA GCATACAGGA CATTTTTCCC GGAAAACGCT
TTAATCCCTA CAATTATGCA ACATATTTTT GTTGTTCCGG AAACGATGTT GCCTCTTTTT
ATGGATGCGT TATTTCTTTG GGAGAATAGT TATGTAAATC CGAATTATTC CTTAGTATTG
GAGGGGATAA AAAAAGAAGT CTTACAAGGC TCCCCGGATC TTCTAAAAAT ATGTCAGGCA
ATCGCCGACT CAAAAATTCA AAAATTAAAA GAGGAAGCCA TAGAGGATTT CAGTAAGGAA
CTCGTTTTTT GGGTTGCTCA AGGAAACACG GTGCGGGCTA ATCAATATTT AGCTTTGTTA
AAAATTTTAG ATCCTAGGGC TTCTTGGGGA CATAAGTTAC TACTTTCTGA GCAAGATTTT
GTAAAAATAG TTTGCGAAGA TGACGAACAT TTTTCACGAC TGAAAGACTA TCTTATTTTA
TGGGAAGAGC AAGATGTTGC CGATGTAGAT CGGCAACAGT TAGTGCACTA TCTCTTGTTT
AGCGCAGAGA ATTTATGGAG AATTGGCAAG GAAGAAGCCT GTGTGCGTTT ATTAAAAGAA
ATTATAGCGT TCTCTCATTA TGACAAGGTT TGTCAAAATC AAGTGTTGCG AATTGTTAAG
CGTTTTTATA CGCAGGCTTT ATCTATGCGG ACTTTTCCAC ACTTAATATT AATAGAAGAT
TTTTTAGATG ATGTGGGGTT GACGACGGCA TTAGTTAGTG ATGCTGAGAT AGCAAATTGT
TTAGCAGATG CGCAGTATCT GTTTTCTACG AAAGATTATC GTCTTTGTAT TATATATAGT
TCTTGGTTAG CACGAGTATC TCCTTCTACA GAAGTTTTAC GATTGCTTGG GTTGAGCCTA
GCAGGACAAA AAGAATATCA AGAGGCATGG GAAATTTTAC AAAAGCTTCC TTTAGGTAAG
GATACTTGTG ATTCCCAAGT GCAGAAGGCT TTGCTTTTGT GCCATAAATA TATAACACGA
CAACAAAAAA ATACTTTCTT CCGTGAATGA
 
Protein sequence
MVRVFLLVGF LLSCFSAGSK LYLFFSSWET TPEQYDGKHQ AVARLREKST LSEGLPIEQE 
QMYLLCCQGF TLQTQRKFKE SEEIFSRIYK KKTSSPFFLK RELLEGRIIN AYFLDNIPLM
AGYIAELEQE AGSEAHICLF KALHAYREKK YNVAIDELSH WFEHIEKTKP LCLDTNIYEL
FPSYVLEDIA AESLIGSGRY VEGRIVLNRI FHKIMSREYA WSVDMYNRLV LMLGQSYLLE
LKEGVRSDLL PEYYKTMVFY QKQMRGFDAV AYRTFFPENA LIPTIMQHIF VVPETMLPLF
MDALFLWENS YVNPNYSLVL EGIKKEVLQG SPDLLKICQA IADSKIQKLK EEAIEDFSKE
LVFWVAQGNT VRANQYLALL KILDPRASWG HKLLLSEQDF VKIVCEDDEH FSRLKDYLIL
WEEQDVADVD RQQLVHYLLF SAENLWRIGK EEACVRLLKE IIAFSHYDKV CQNQVLRIVK
RFYTQALSMR TFPHLILIED FLDDVGLTTA LVSDAEIANC LADAQYLFST KDYRLCIIYS
SWLARVSPST EVLRLLGLSL AGQKEYQEAW EILQKLPLGK DTCDSQVQKA LLLCHKYITR
QQKNTFFRE