Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0006 |
Symbol | |
ID | 1245530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | + |
Start bp | 6749 |
End bp | 7786 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637060795 |
Product | rod shape-determining protein MreC |
Protein accession | NP_296390 |
Protein GI | 15834631 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0102179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTATCCA CGGTTTTGCT AAGGCCTATG AATACTCTCG GTCCGTATCA TAAACGTATT CGGTTTATTA CTTATCTCTT TGTCGCTTCA GGAATTATTG TAAGTTGGAA TCTTCCTAGA AGCGTTTATG AGTCGCTTCA GGATAAATTT GTAAGTGTAT GTTCTAAATT CCTTCCTTTT CAACAAAGGG CCAATTCAAA GGCCCTTATT GAAGAGAGTC AAAGTTTTCT TCTGCAAGAA AAAATCCGAT TATTAGAAGA ACGCATACTT TCTATGGAAG AGACTTCAAA ATCTCCTCCA TTATTTCCTG AAATTTTGTC TTCTTACTTT CAATCTCCGA TCATGGGGAG AGTGATTTTC CGAGATCCCG CTCATTGGGG GAGTTCTTGT TGGATTAATA TTGGGAAGCA GCATGGGGTT AAAAAAAATT CTCCTGTTGT TTGCGGAAAG GTTGTTGTTG GATTAGTGGA CTTTGTTGGC AGTGCTCAAT CAAGGGTACG ATTAATCACT GATGTGGGAA TAAAACCTTC CGTTATGGCT GTTAGGGGGG AGCTTCAAAC TTGGGTAGTG AAGGATCAGC TACGTACATT AGCAAGAAAT GTGACAAACC TTCCGACATC TGCATTTGCA GATAGTGATA AGCAGCAAGC TTTACAATGC TTAAAAGCAT TAGAGAGCTG TTTATCCTCG TCTGAACACA ATGATTTTGC TCTTCGAGGG ATTGTTTGTG GTAGAGGGGA CCCTATTTGG AAACCTGAGG CATCCGTTCT AACTGGGAGT GATTTTGGTT TTGTAGATGG GAAAACTATT GAGGTTGGAG ATGTTCTTGT TACTACGGGA TTGGATGGCG TTTTTCCTCC AGGATTACTT GTTGCTACAG TCAGCGAAAT TTTACCGAAG AGTGAGGGGG CTTGTTCTTT AAAGATAAAA GCACAATCTT TGGCTCCAGA TTGTTCTGTA GTTGACTTTT TGGTATTGCC TCCCATGGAT TTTAATCCTA ATGATCGTCC GGACATTTTC GGATTAATTT GGGAGTAA
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Protein sequence | MLSTVLLRPM NTLGPYHKRI RFITYLFVAS GIIVSWNLPR SVYESLQDKF VSVCSKFLPF QQRANSKALI EESQSFLLQE KIRLLEERIL SMEETSKSPP LFPEILSSYF QSPIMGRVIF RDPAHWGSSC WINIGKQHGV KKNSPVVCGK VVVGLVDFVG SAQSRVRLIT DVGIKPSVMA VRGELQTWVV KDQLRTLARN VTNLPTSAFA DSDKQQALQC LKALESCLSS SEHNDFALRG IVCGRGDPIW KPEASVLTGS DFGFVDGKTI EVGDVLVTTG LDGVFPPGLL VATVSEILPK SEGACSLKIK AQSLAPDCSV VDFLVLPPMD FNPNDRPDIF GLIWE
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