Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1968 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 1753534 |
End bp | 1755402 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | glycoside hydrolase 15-related protein |
Protein accession | ACX92179 |
Protein GI | 261602576 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTTT CCTCCATAGG AAATGGCAGA ATGCTGATAA ACTTTGATGA GAAAGGAAGA ATAGTCGATA TTTATTATCC TTATATAGGA ATGGAGAACC AGACTTCTGG AAACCCAATT AGGTTAGCTA TTTGGGACAA AGATAAGAAA GTGGCATCTC TAGATGAGGA TTGGGAAACT ACTGTATTAT ATATAGATGA AGCTAATATG GTTGAGATTA GGAGTGATGT TAAGGAGTTA GGACTTTCTC TTCTCTCTTA TAACTTTCTA GATTCTGATG ATCCGATATA TATGTCTATT GTAAAAATAG CAAATAACGA AAATAATAGC AGAAATATAA AAGTATTTTT TATACATGAT ATAAATTTAT ATTCAAACCC TTTTGGGGAC ACTGCATTCT ATGATCCCCT ATCCCTTTCA ATTATACATT ATAAGTCTAA ACGATATTTA GCCTTTAAAG TGTTTACCAC GGTATCGACA CTTTCTGAGT ATAACATAGG CAAAGGTGAC TTAATTGGAG ATATTTATGA TGGCAATTTA GGACTTAATG GTATAGAAAA TGGTGATGTA AATTCAAGTA TGGGTATAGA GATAAATATA GATCCTAATT CCTATTTGAA ATTATACTAC GTAATAGTCG CAGATAGAAA CTTGGAAGGC TTAAGGCAAA AAATAAGGAA AATAAACTTT GCAAACGTAG AGACATCGTT TACGTTAACC TATATGTTTT GGCGGAATTG GTTAAAGAAA AATAAACTCT TCAGAAATAA TTTAATGCAG GATATTAAGA GAGTCTATGA TGTGAGTCTT TTTGTGATAA GAAATCACAT GGACGTTAAC GGGTCAATAA TAGCTTCCTC AGACTTCTCC TTCGTCAAGA TTTATGGGGA CTCATATCAG TATTGTTGGC CTAGAGATGC GGCAATTGCA GCTTATGCTC TAGATCTAGC TGGCTATAAG GAACTAGCAT TAAAACACTT CCAGTTCATT TCTAATATTG CAAATTCTGA AGGCTTCCTA TATCATAAAT ATAATCCAAA TACAACTCTA GCTAGTTCTT GGCATCCTTG GTATTATAAA GGTAAAAGGA TATACCCAAT TCAAGAGGAT GAGACGGCAT TAGAAGTATG GGCAATAGCT AGTCATTACG AAAAATATGA AGATATTGAC GAAATACTTC CATTATATAA GAAGTTCGTG AAGCCAGCCT TAAAATTTAT GATGTCTTTT ATGGAAGAAG GATTGCCAAA ACCTTCTTTT GACCTATGGG AAGAAAGGTA TGGTATACAT ATTTACACAG TATCTACGGT TTACGGCGCA TTAACAAAGG GAGCAAAGTT AGCTTATGAT GTAGGTGATG AAATATTAAG TGAAGATTTA AGTGATACAT CGGGTTTATT AAAAGGAATG GTTTTGAAAA GAATGACTTA TAATGGAAGA TTTGTTAGAA GAATAGACGA GGAAAATAAC CAAGATCTAA CTGTGGACTC AAGTCTCTAT GCTCCATTCT TCTTTGGTCT TGTTAATGCA AATGACAAAA TCATGATAAA TACCATTAAC GAGATTGAAA GCAGATTAAC TGTGAATGGT GGGATAATAA GGTATGAGAA TGATATGTAT CAGAGGAGGA AAAAACAACC AAACCCTTGG ATAATTACGA CATTATGGCT ATCTGAATAT TATGCAACAA TTAACGATAA AAATAAGGCA AACGAGTACA TAAAATGGGT AATTAATAGG GCATTACCAA CCGGCTTTTT ACCAGAACAA GTTGATCCAG AAACTTTTGA GCCAACTTCA GTTACACCTT TGGTATGGTC TCATGCTGAA TTCATAATAG CAATTAATAA GCTCTTAAAC CATATATAA
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Protein sequence | MRVSSIGNGR MLINFDEKGR IVDIYYPYIG MENQTSGNPI RLAIWDKDKK VASLDEDWET TVLYIDEANM VEIRSDVKEL GLSLLSYNFL DSDDPIYMSI VKIANNENNS RNIKVFFIHD INLYSNPFGD TAFYDPLSLS IIHYKSKRYL AFKVFTTVST LSEYNIGKGD LIGDIYDGNL GLNGIENGDV NSSMGIEINI DPNSYLKLYY VIVADRNLEG LRQKIRKINF ANVETSFTLT YMFWRNWLKK NKLFRNNLMQ DIKRVYDVSL FVIRNHMDVN GSIIASSDFS FVKIYGDSYQ YCWPRDAAIA AYALDLAGYK ELALKHFQFI SNIANSEGFL YHKYNPNTTL ASSWHPWYYK GKRIYPIQED ETALEVWAIA SHYEKYEDID EILPLYKKFV KPALKFMMSF MEEGLPKPSF DLWEERYGIH IYTVSTVYGA LTKGAKLAYD VGDEILSEDL SDTSGLLKGM VLKRMTYNGR FVRRIDEENN QDLTVDSSLY APFFFGLVNA NDKIMINTIN EIESRLTVNG GIIRYENDMY QRRKKQPNPW IITTLWLSEY YATINDKNKA NEYIKWVINR ALPTGFLPEQ VDPETFEPTS VTPLVWSHAE FIIAINKLLN HI
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