Gene Ssol_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1965 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1749187 
End bp1750887 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content36% 
IMG OID 
ProductStarch synthase 
Protein accessionACX92176 
Protein GI261602573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00319381 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGA TTGAATCATT GTGGTTACCT GAGGACATTA AAAAAGTGTG GATGATAACA 
TTTGAATTGC AAAAGATAGC AAGTGTTGGA GGATTAGGAA ATGCTGTATA TAACATAGCT
AAACATCTAG CTGAAAAGGG AGTAGATATT ACGGTTTTCT TGCCATCTCA TGGAAGGCAT
CTAAATGAAT ATTATAGGTC TCTCTTAAGT TTAAGACATA TTGACATGAT CGTTGAGGGA
AGAAGAAAGG GTATAGATAA TAACTATTAT AATTATAAAA TAGGATTTGA AGAAGGAAAA
ATAGATAATT TCAAGGTAAT TTTGGTAAAA GGATTAGATT ATAACACTGG TAGGGTATTA
GATTCATGGA ATATCTATGA TAACACAATG GAGAAAATTT CGCTATTAAC AAGAGGATTA
GAGGGGTTCA CTTTAGGCAA TCTATCTAAC CTTCCAGATA TAATCCATGC ACAAGATTGG
CACGCCGTAA TTCCCGCAGT TAGGATAAAA CAACTCTTGG AAGAGAGACG AATAATCGTC
CCATTTATTT ACACTATTCA CTTACTGAAT TACATTGGTG TACCTTGGCA CTACGCTTCT
CAAGACTGGT CTGGAATTGA GGATTGTTGG CATTATATTT GGATGGTAGC TAAGCATGAA
TTATATAAAT ATTCATATGT ATGGGATGTG TTGTCAGGTG GAAAAATTGA GAAATTTGGT
TGTTACGAGG CTGATATGGT GAGTAGTGTA AGTTACAGTT ATTTAAGTTT TGACGTATTT
AATTTTGTAG GAAATTGGGT AGCCAATAAA TCATGTGTAA CGTATAATGG TACGGATTGG
GATGTGGAAG AGATCCAAAA TAAGGCTGTT ACAATGTATG GAACTAAGGA CAGAAGGGAG
TTAAGGAGAA GGCTACTTTC ATCTCTGCAC TCCCTAAGGG TTATTCCAGA GGATTACACT
ACCGGCAATA TGCTATGGAA TAATAGAAAT AGACTAGGAT TAAGAGATGA TTGGACTTAC
GACGATTTAG GGGAAGGACC CCTTGTTCTA TTCACTGGGA GATTAGTATA TCAAAAAGGT
GTAGATTTAC TTTTAAGGGC TATGAAAACA GTTGTGAATG AGATAAATAA TGCTAGGCTC
TTAATTTTTG GGCTACCGTC TGGGGATTAC AACTTACTTT GGGATATTAT AGAGAGGGCT
TCAGAAATTA AGGATAATAT TAGGTTAATA GTGGGTAGAA TGGATTTAGA TTTATATAAA
TTGTTTCACT ACGTATCTTC AGTCTTCGTC ATTCCATCTA GATGGGAACC ATTTGGCATA
AATTCAATTG AGGCTATGGC TATGGGGTTG CCAGTAATTG CCTATAGCGT AGGGGGTTTA
AGAGAAACAG TCGTTGACAT TAGGGAGGAT AAGAATAATG CCACAGGTCT CTTAATTAAG
CCTGAAAGTA TAGACGAATT AGCTAGAGCC ATAAGGATTG CATTATATTT GTCAGAGGCT
TCTGAGCTAA ATAAAAGCGA TTTGTTATAT AAGGCGAGTG AGGTTAAAGT AGATGATACG
AGATACTGGG ATAAGGTACG TGAAAATGCA ATAACTAGGG TTAAGAGTAG ATTTAGATGG
GATGCAGTGA TAAACTCCTT AACTGAGTGT TATAGAAAGA CTCTCGATAT GGCTAAATAT
AGGGCTTTAG CCTCTTTTTG A
 
Protein sequence
MKRIESLWLP EDIKKVWMIT FELQKIASVG GLGNAVYNIA KHLAEKGVDI TVFLPSHGRH 
LNEYYRSLLS LRHIDMIVEG RRKGIDNNYY NYKIGFEEGK IDNFKVILVK GLDYNTGRVL
DSWNIYDNTM EKISLLTRGL EGFTLGNLSN LPDIIHAQDW HAVIPAVRIK QLLEERRIIV
PFIYTIHLLN YIGVPWHYAS QDWSGIEDCW HYIWMVAKHE LYKYSYVWDV LSGGKIEKFG
CYEADMVSSV SYSYLSFDVF NFVGNWVANK SCVTYNGTDW DVEEIQNKAV TMYGTKDRRE
LRRRLLSSLH SLRVIPEDYT TGNMLWNNRN RLGLRDDWTY DDLGEGPLVL FTGRLVYQKG
VDLLLRAMKT VVNEINNARL LIFGLPSGDY NLLWDIIERA SEIKDNIRLI VGRMDLDLYK
LFHYVSSVFV IPSRWEPFGI NSIEAMAMGL PVIAYSVGGL RETVVDIRED KNNATGLLIK
PESIDELARA IRIALYLSEA SELNKSDLLY KASEVKVDDT RYWDKVRENA ITRVKSRFRW
DAVINSLTEC YRKTLDMAKY RALASF