Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1878 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 1669581 |
End bp | 1672031 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | valyl-tRNA synthetase |
Protein accession | ACX92090 |
Protein GI | 261602487 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTAAACC AAGATGAAAT TTTAAAGAAG ATGGAAGAGT GGCCAAAACA CTATAACCCT AAGGAAATTG AGGAAAAATG GCAAAAGATA TGGCTAAGTG AGGAATATTG GAGAGACGTA TTTAGATTCA GAGATGAGGA CGATAAAGCA CCAAGATTTG TTATTGATAC TCCTCCCCCT TTTACTAGCG GAGAACTTCA TATGGGGCAC GCGTATTGGG TTACAATAGC TGATACTATA GGTAGGTTTA AGAGATTAGA AGGATATAAT GTACTATTAC CTCAAGGATG GGACACACAA GGTTTACCTA CTGAACTAAA AGTGCAATAT AAGTTAGGAA TCCCGAAAGA TAATAGGCAA CTATTTCTCC AGAAATGTAT AGAATGGACA GAAGAAATGA TTAAGAAAAT GAAGGAGGCA ATGATTAGAC TAGGTTATAG GCCAGAATGG GAAAGATTTG AATATAAGAC ATATGAGCCA AAATATAGAA AAATTATCCA GAAAAGTCTT ATTGACATGT ATAAAATGAA TTTAATTGAG ATGAGAGAAG GCCCAGTAAT TTGGTGCCCT AAGTGTGAGA CTGCATTAGC ACAAAGTGAA GTAGGTTACT TAGAGAAGGA GGGAATTCTT GCCTATATAA AATTTCCATT AAAAGAAGGA GGAGAAATAG TAATAGCGAC TACCAGACCT GAATTACTAG CTGCTACACA AGCTATCGCC GTAAATCCAA TGGATGAAAG ATATAAGAAT TTAGTAGGAA AAATAGCATT GGTACCAATA TTTAATATCG AGGTCAAAAT AATATCTGAC GCGGATGTGG AAAAGGAATT CGGAACCGGA GCAGTAATGA TAAGTACTTA TGGCGATCCC CAAGATATAA AGTGGCAATT GAAATACAAC TTACCGATTA AGGTTATAGT TGACGAAAAA GGAAGGATAA TAAATACAAA TGGAATACTT GATGGATTGA AAATTGAACA AGCTAGAAAT AAAATGATAG AACTCCTAAA GACTAAAGGA TACCTTGTTA AAGTAGAGAA GATAAAGCAC AATGTACTAT CACACGTTGA GAGAAGTGAT TGTCTATCTC CAGTAGAATT CTTAGTTAAA AAGCAAATAT ACATTAAAGT TTTAGATAAG AAGCAAAAAT TATTAGAAGA ATATAAAAAG ATGAAATTTA AACCGGCTAG AATGTCCTAT TATCTCGAGG ATTGGATAAA GAGTATAGAG TGGGATTGGA ATATAACTAG GCAAAGGATT TATGGTACGC CATTACCGTT TTGGTACTGC GAAAATGGGC ATTTAGTACC AGCTAAAGAA GAGGACTTGC CAATAGATCC TATCAAAACT AGCCCGCCAT TAGAGAAATG TCCATTATGC GGATCAGAAC TTAAACCAGT TACCGATGTT GCAGACGTGT GGATAGACTC TAGCGTAACA GTCCTTTACC TAACCAAGTT CTATGAAGAT AAAAACGTTT TCAATAGGAC TTTCCCAGCA TCACTTAGAC TTCAAGGTAC TGATATAATT AGAACTTGGT TATTCTATAC CTTCTTTAGG ACTTTAATGT TAGCTAATAA TGTACCTTTT ACTACAGTTC TTGTTAATGG TCAAGTCCTT GGACCAGATG GAACTAGAAT GAGTAAAAGT AAGGGAAATG TAGTATCACC ATTAGATAGA GTTAATGATT TTGGAGCAGA TGCGATTAGA ATGGCTCTTC TAGACGCAAG TATTGGTGAC GATTTTCCAT TTAAATGGGA TATAGTGAAA GGAAAGAAGA TGTTATTGCA AAAATTATGG AATGCAAGTA GACTAGTCTA CCCTTTCATA GCAAAACAAA GACTTGATAA ACCTAAAAGC CTACATATAG TAGACAAATG GATCTTACAA GAACATAAGA AATTCGTAAC TAAAGCAATA AATGCATATG AGAATTACGA CTTTTATTTA GTACTTCAAG AGCTATATAA CTATTTCTGG GAGATCGTAG CTGACGAGTA TTTGGAAATG ATAAAGCATA GGTTATTTGA TGACGATAAC TCTGCAAAAT ATACTATACA GAGAATAATA AGAGATATAA TCATATTGCT TCATCCTATC GCACCTCATA TAACAGAGGA AATTTACTCA AGGCTATTTG GCCACAAGAA GAGTGTTCTC CTAGAAGAAT TACCAAAAGT AGATGATATT GAGGAGAATA AAAGAATAGA TGAACTTGGA GAAGTAATAA AGAAAACGAA CTCGCTCATA AGATCAGAGA AGATAAAGAA TAGATTATCA ATGAATACTC CAGTTAGTGT AAAATTGTAC GCTTCTAAGC AAGTTATTGA ATTAATTAAT GAAGTGAAAG ATGACGTAAT GAAGACATTA AAGGTAACTA ATCTTGAACT AATAGAATCG AATGAAGAAA AAGTGGAAAT TAAAACTGCT AATCAGTCCA TGGGAGTTTA G
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Protein sequence | MLNQDEILKK MEEWPKHYNP KEIEEKWQKI WLSEEYWRDV FRFRDEDDKA PRFVIDTPPP FTSGELHMGH AYWVTIADTI GRFKRLEGYN VLLPQGWDTQ GLPTELKVQY KLGIPKDNRQ LFLQKCIEWT EEMIKKMKEA MIRLGYRPEW ERFEYKTYEP KYRKIIQKSL IDMYKMNLIE MREGPVIWCP KCETALAQSE VGYLEKEGIL AYIKFPLKEG GEIVIATTRP ELLAATQAIA VNPMDERYKN LVGKIALVPI FNIEVKIISD ADVEKEFGTG AVMISTYGDP QDIKWQLKYN LPIKVIVDEK GRIINTNGIL DGLKIEQARN KMIELLKTKG YLVKVEKIKH NVLSHVERSD CLSPVEFLVK KQIYIKVLDK KQKLLEEYKK MKFKPARMSY YLEDWIKSIE WDWNITRQRI YGTPLPFWYC ENGHLVPAKE EDLPIDPIKT SPPLEKCPLC GSELKPVTDV ADVWIDSSVT VLYLTKFYED KNVFNRTFPA SLRLQGTDII RTWLFYTFFR TLMLANNVPF TTVLVNGQVL GPDGTRMSKS KGNVVSPLDR VNDFGADAIR MALLDASIGD DFPFKWDIVK GKKMLLQKLW NASRLVYPFI AKQRLDKPKS LHIVDKWILQ EHKKFVTKAI NAYENYDFYL VLQELYNYFW EIVADEYLEM IKHRLFDDDN SAKYTIQRII RDIIILLHPI APHITEEIYS RLFGHKKSVL LEELPKVDDI EENKRIDELG EVIKKTNSLI RSEKIKNRLS MNTPVSVKLY ASKQVIELIN EVKDDVMKTL KVTNLELIES NEEKVEIKTA NQSMGV
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