Gene Ssol_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1877 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1668359 
End bp1669567 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content36% 
IMG OID 
Productaminotransferase class I and II 
Protein accessionACX92089 
Protein GI261602486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCTCGC TACTAGACTT TAACGGAAAT ATGTCACAAG TTACTGGAGA GACTACCTTA 
TTGTATAAGG AAATTGCTAG AAACGTAGAA AAGACTAAGA AGATTAAAAT TATCGACTTT
GGGATAGGAC AACCAGATTT ACCTACATTT AAACGTATAA GAGATGCCGC AAAGGAGGCG
CTAGATCAAG GTTTTACTTT CTACACTTCG GCATTCGGTA TTGATGAATT AAGGGAAAAA
ATAGCTCAAT ACCTAAATAC TAGATACGGT ACTGACGTAA AGAAGGAGGA AGTGATAGTA
ACACCTGGTG CTAAGCCTGC GCTTTTCTTA GTCTTTATAT TATATATTAA TCCAAGTGAC
GAGGTAATAC TCCCAGATCC CTCCTTCTAT TCTTACGCTG AGGTTGTTAA GTTACTAGGA
GGAAAGCCAA TATATGCCAA TTTAAAGTGG AGCAGAGAAG AAGGGTTCTC AATAGATGTA
GACGACCTAC AATCTAAAAT ATCGAAAAGA ACCAAAATGA TAGTATTCAA TAATCCTCAT
AATCCGACTG GTACTCTATT CTCTCCTAAT GATGTTAAGA AAATTGTGGA TATAAGTAGG
GATAATAAAA TTATCTTACT ATCTGACGAG ATTTATGATA ATTTTGTATA TGAAGGTAAG
ATGAGAAGTA CTCTTGAAGA CTCAGATTGG AGAGATTTCT TAATTTACGT TAATGGATTT
AGTAAAACTT TCTCGATGAC TGGATGGAGA TTAGGTTATA TTGTAGCGAA GCGTGAAATT
ATCCAGAAAA TGGGAATTTT GGCTGCTAAC GTATACACTG CTCCTACAAG TTTTGTACAA
AAAGCCGCAG TAAAGGCCTT TGATACTTTC GACGAAGTTA ACCAAATGGT CAGCCTATTT
AAGAAGAGGA GAGACGTAAT GTATGATGAA CTTACTAAGG TCAAAGGAGT TGAAGTATCT
AAACCAAATG GAGCATTCTA TATGTTCCCA AATGTTAGTA AGATACTTAA AACAAGTGGA
TTTGACGTCA AGTCACTTGC CATAAAGCTA ATTGAAGAAA AAGGCGTAGT TACAATACCT
GGTGAAGTTT TCCCATTAAA TATAGGTAAG GAGTTTTTAA GATTAAGTTT TGCTGTGAAC
GAAGAAGTTA TTAAAGAGGG CATACAAAAA ATTAGAGAGT TCGCGGAACA GATGATGAAT
TCCCGATAG
 
Protein sequence
MVSLLDFNGN MSQVTGETTL LYKEIARNVE KTKKIKIIDF GIGQPDLPTF KRIRDAAKEA 
LDQGFTFYTS AFGIDELREK IAQYLNTRYG TDVKKEEVIV TPGAKPALFL VFILYINPSD
EVILPDPSFY SYAEVVKLLG GKPIYANLKW SREEGFSIDV DDLQSKISKR TKMIVFNNPH
NPTGTLFSPN DVKKIVDISR DNKIILLSDE IYDNFVYEGK MRSTLEDSDW RDFLIYVNGF
SKTFSMTGWR LGYIVAKREI IQKMGILAAN VYTAPTSFVQ KAAVKAFDTF DEVNQMVSLF
KKRRDVMYDE LTKVKGVEVS KPNGAFYMFP NVSKILKTSG FDVKSLAIKL IEEKGVVTIP
GEVFPLNIGK EFLRLSFAVN EEVIKEGIQK IREFAEQMMN SR