Gene Ssol_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1395 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1293266 
End bp1295545 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content38% 
IMG OID 
ProductAAA family ATPase, CDC48 subfamily 
Protein accessionACX91629 
Protein GI261602026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA CTTATTTTAA ACGTTTCGGA AAGATGAATA ATATGTCCCA ACAATTGAAA 
TTGAGAGTGG TAGAGGCTAG GCAAAGAGAT GTTGGGAGAA AAGTCGCCAG AATAACGGAT
TACACTATAA GCAGACTAGG CATAGAAAAC GGTGACTATG TAGAGATTAT TGGACCTTCT
GGTTCTGCGT TAGCTCAAGC ATTAATAGGA GACGGAATTG CAGACAATGA GATAAGAGTA
GATGGTTACA TTAGAAGATC CATAGGAGTG GGTATTGGAG ATGAAGTTAC AGTAAAGAGA
GCACAAGTAC AAGATGCCAC TAAAGTAGTT TTAGCTCCAA CACAACCTAT ATCCTTTAGT
CAGAGTTTCG TAGAATACGT TAAAGACTGG TTAATGGATA AACCGATAAG CAGAGGAGAA
ACAATTTCTG TACCTACTTA TGTTGGCTCA ATAGATTTTG TCGTAGTTTC GACTCAGCCT
TCACAATCAG TAAGGATTAC TGGTAGGACA TCATTAGAGA TAAGACAAGA ACCAGTAAAA
GAGTCTGCAG CAGTACCTAA GGTAACTTGG GAAGATATTG GCGATCTTGA AGATGTAAAA
GAGAAAATAA GAGAAATAGT AGAACTACCA ATGAGACATC CAGAAGTTTT CCAGCATCTA
GGAATAGAAC CTCCAAAGGG TGTACTACTA TATGGACCAC CGGGAGTTGG AAAAACCTTA
TTGGCTAGAG CACTGGCTAA TGAGATAGGT GCATACTTCA CTTCAATTAA TGGACCAGAA
ATAATGAGTA AATTCTATGG GGAAAGTGAG CAAAGATTAA GAGAAATATT TGAGGAAGCA
GAAAAGAATT CTCCAGCAAT AATATTCATT GATGAAATTG ATGCAATAGC ACCAAAGAGA
GAAGAAGTTA CTGGAGAAGT AGAGAAAAGA GTAGTAGCGC AATTGTTAAC TCTAATGGAT
GGAATTAAAG GAAGAGGAAA AGTAATAGTT ATAGGAGCAA CTAATAGACC AGATGCAGTA
GATCCTGCAT TAAGAAGACC TGGCAGATTT GATAGGGAAA TAGAAATTAG ACCACCCGAT
GCTAAGGCTA GAAAAGAGAT TCTACAAGTA CATACCAGAA ACATGCCTCT AGCTGAGGAT
GTAGATTTAG ATAAAATTTC TGAGCAGACT CACGGTTACA CTGGAGCTGA TCTCGCAGCT
CTGGCTAGAG AGGCAGCTAT GAATGCATTG AGAAGATTTA TAAATGAACG CAAGATTAAT
CTAGAACAAG AACAAATACC AGTAGATGTT TTAAAGGAAT TGAAAGTAAC AATGCAAGAT
TTCATTGACG CCATGAAGTT CATTCAACCA ACACTCCTTA GAGAAGTATA CGTTGAAGTT
CCGAAGGTTA AATGGGAGGA TATTGGAGGA CTGGAAGAAG CCAAACAGCA ATTAAGAGAG
GCTGTGGAGT GGCCATTGAA ATTTCCAGAA ATGTTTGAAA AGCTTGGAAT TAGACCACCT
AAGGGTATAT TGTTATTTGG TCCACCCGGA ACTGGAAAGA CAATGCTAGC GAAGGCTGTG
GCGACTGAAA GCGGAGCAAA CTTCATAGCA GTGAGAGGAC CAGAAATATT ATCCAAATGG
GTAGGTGAAA GTGAAAAAGC AGTTAGAGAA ATATTTAGGA GAGCAAGACA AACGGCTCCT
TGCGTAATAT TCTTTGATGA AATAGATTCG ATTGCACCCA TGAGAGGCTT TACACATGAT
TCTGGTGTAA CAGAAAGAAT AGTAAATCAG TTATTGTCAG AAATGGATGG AATTCAATCA
CTAAATAGAG TTGTAGTTAT AGCTGCAACT AATAGACCAG ATATTTTAGA TCCAGCATTG
CTAAGACCTG GTAGGTTTGA TAGATTAATA TATGTTCCGC CACCTGATGA GAAGGCTAGA
ATAGAGATAC TCAAAATTTA CACTAGAACA TTACCTATAG ATTCTAGTGT AAACCTAGAG
GAGTTAGCCA AAAAACTTGA AGGATATACG GGAGCTGATA TAGAAGCCTT AGCTAGGGAA
ACAACAATGA AAGTACTGAG ACAAAAGTAT TACGATTGCT TAAATAAAGC CAAAAAGGAG
TGCAAAGATC AAGAGTGCAC TGATAAGACT ATAAAGAGTT GCATGAGCAA TCTAGAAATA
AAAATTACTA TGCAAGATTT CCTAGATACC ATGAAGATTG TAACGCCTAG TCTAACTAAA
GCTGATATTA TGAGATATGA AAACATGGTA AAAGAAATAA AGAGATCGGT GATTGGTTGA
 
Protein sequence
MSKTYFKRFG KMNNMSQQLK LRVVEARQRD VGRKVARITD YTISRLGIEN GDYVEIIGPS 
GSALAQALIG DGIADNEIRV DGYIRRSIGV GIGDEVTVKR AQVQDATKVV LAPTQPISFS
QSFVEYVKDW LMDKPISRGE TISVPTYVGS IDFVVVSTQP SQSVRITGRT SLEIRQEPVK
ESAAVPKVTW EDIGDLEDVK EKIREIVELP MRHPEVFQHL GIEPPKGVLL YGPPGVGKTL
LARALANEIG AYFTSINGPE IMSKFYGESE QRLREIFEEA EKNSPAIIFI DEIDAIAPKR
EEVTGEVEKR VVAQLLTLMD GIKGRGKVIV IGATNRPDAV DPALRRPGRF DREIEIRPPD
AKARKEILQV HTRNMPLAED VDLDKISEQT HGYTGADLAA LAREAAMNAL RRFINERKIN
LEQEQIPVDV LKELKVTMQD FIDAMKFIQP TLLREVYVEV PKVKWEDIGG LEEAKQQLRE
AVEWPLKFPE MFEKLGIRPP KGILLFGPPG TGKTMLAKAV ATESGANFIA VRGPEILSKW
VGESEKAVRE IFRRARQTAP CVIFFDEIDS IAPMRGFTHD SGVTERIVNQ LLSEMDGIQS
LNRVVVIAAT NRPDILDPAL LRPGRFDRLI YVPPPDEKAR IEILKIYTRT LPIDSSVNLE
ELAKKLEGYT GADIEALARE TTMKVLRQKY YDCLNKAKKE CKDQECTDKT IKSCMSNLEI
KITMQDFLDT MKIVTPSLTK ADIMRYENMV KEIKRSVIG