| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssol_1340 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfolobus solfataricus 98/2 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | CP001800 |
|---|
| Strand | + |
|---|
| Start bp | 1237455 |
|---|
| End bp | 1238354 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | |
|---|
| Product | regulatory protein MarR |
|---|
| Protein accession | ACX91576 |
|---|
| Protein GI | 261601973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00576351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGTA AAGATAAAGT TATATCTATA TTGAAGGAAA AAGGTCCTAT ATCCCAAACT
GAATTAAGTA AACTTTCTGG ATTATCGAAG AGCAGATTAT CTGAAGTCTT ATCCGAACTT
GAGAAACAAG GTATAGTAAA AAGGAGGAAG GTTTTAGGAA AAAACCTTGA GGTAAGTTTA
TCTCAAGATA GATTTTTGAG ATTGGGAATT ATAAGAGCTG CAGAATATCC ATTTATAATT
CCATTTATTA AAAACTTGGA AAATAGAGGA TATAGCGTTA CTGTTAAAAT TTATGAAAAT
GGAATTGATC TAACTAGGGA TTTAGTTGAA GCAAAGTTAG ATTTAGGCCT ATCCCCGATC
ATAACGCAAA TAATATTTTC GACGATATAT CGGAATATAA GAATTATTGG GGGAGGCGCT
AAAGGGGGAG GTGGTATTAT AGGCAAAACT TGTAACAGAA TTGCATCAAC TGTAATGTCA
AGTATGGAAA TATGGGCGTT TAGTGAATTC AAGAATATTG AAATCATTCC ATCTTATAGT
TCATATGAAA TGTTAGACTT TCTTGAAAAA GGGATAGTAG ATGGTATAGC AATTTGGGAA
CCTTTTTTGT CAATTTTAGA GAGGAAGGGA CATAAGGTAC ATAGATTTAC ACCATTACAC
TGTTGTACTT TAGCAGTAAG GGAAACTATG GATTGGGAGA GAATAAAGAA TATTTATGAA
GAATCGTTTA GCTGGTTTAA ATCTTCCATA GATAGATGGG TTTCAAGTTA TTCAAACTTA
CTTAATATTG ATTATAATAT TCTAAAAGAA GCATCAAAAA ATTATGAATT CGATTATTAC
CTCGACCTTA AGGAGTTCAA AAACTCATTA AAAAATACTG GTATTTTTAT ACCAATTTAG
|
|---|
| Protein sequence | MGSKDKVISI LKEKGPISQT ELSKLSGLSK SRLSEVLSEL EKQGIVKRRK VLGKNLEVSL
SQDRFLRLGI IRAAEYPFII PFIKNLENRG YSVTVKIYEN GIDLTRDLVE AKLDLGLSPI
ITQIIFSTIY RNIRIIGGGA KGGGGIIGKT CNRIASTVMS SMEIWAFSEF KNIEIIPSYS
SYEMLDFLEK GIVDGIAIWE PFLSILERKG HKVHRFTPLH CCTLAVRETM DWERIKNIYE
ESFSWFKSSI DRWVSSYSNL LNIDYNILKE ASKNYEFDYY LDLKEFKNSL KNTGIFIPI
|
|---|
| |