Gene Ssol_1204 details

Gene Information

• Locus tag: Ssol_1204
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: -
• Start bp: 1120477
• End bp: 1123851
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 37%
• Product: DNA-directed RNA polymerase subunit B
• Protein accession: ACX91442
• Protein GI: 261601839

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.074104
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCATCTA ATTTAACCAT TGATGAAAGA TGGAGAGTCA TCGAAGCGTA CTTTAAATCC 
AAAGGCTTAG TTAGACAGCA TCTGGATTCA TACAATGACT TTGTTAGAAA TAAGCTTCAA 
GAAATTATTG ACGAACAAGG AGAAATACCC ACAGAAATAC CAGGTTTGAA AGTGAGATTA 
GGCAAGATAA GGATAGGAAA ACCAAGAGTC CGGGAATCGG ATAGAGGAGA AAGAGAAATC 
AGTCCCATGG AAGCTCGATT AAGGAACTTA ACTTATGCCG CTCCACTATG GCTTACAATG 
ATCCCAGTTG AAAATAATAT TGAAGCAGAA CCAGAAGAGG TTTATATAGG CGACCTGCCT 
ATAATGCTTA AATCAGCCAT AGACCCAATA TCACAGTATA CTCTAGATAA GCTAATTGAG 
ATAGGTGAAG ATCCTAAAGA CCCAGGAGGG TATTTCATAG TAAATGGATC TGAAAGAGTT 
ATAGTAACTC AAGAAGATTT GGCTCCAAAT AGAGTTCTTG TAGATACTGG AAAGACAGGA 
TCAAACATTA CGCATACAGC GAAAATTATC TCGAGTACTG CGGGCTATAG AGTGCCTGTG 
ACAATAGAAA GATTAAAAGA TGGTACATTT CATGTATCTT TTCCAGCAGT TCCCGGTAAG 
ATTCCGTTTG TTATTCTAAT GAGGGCACTG GGTATATTAA CCGATAGAGA TATAGTTTAT 
GCGGTATCAT TAGATCCTGA GGTTCAGAAT GAATTATTTC CTTCTCTAGA GCAAGCAAGT 
TCGATAGCCA ACGTTGATGA TGCACTAGAT TTTATAGGTA GTAGAGTAGC TATAGGCCAA 
AAGAGAGAAA ACAGAATAGA AAAAGCACAG CAGATAATTG ATAAATATTT CCTACCCCAT 
TTAGGCACTT CAGCAGAAGA TAGAAAGAAG AAAGCGTATT ATTTAGCTTA CGCTATATCA 
AAAGTAATTG AATTATATCT TGGTAGAAGG GAACCCGACG ATAAAGATCA TTACGCTAAC 
AAAAGATTAA GATTAGCTGG AGATTTGTTT GCATCATTAT TTAGAGTAGC TTTCAAAGCT 
TTCGTAAAAG ATTTAACATA TCAATTAGAG AAATCTAAGG TAAGAGGTAG GAAACTCGCT 
TTAAAGGCAT TAGTTAGACC AGATATTGTT ACAGAAAGAA TAAGGCATGC ATTAGCTACT 
GGGAACTGGG TTGGTGGAAG AACTGGAGTT AGCCAATTAC TTGATAGGAC CAACTGGCTT 
TCTATGTTAA GCCATCTGAG GAGAGTAATA TCCTCACTAG CAAGGGGTCA ACCTAATTTC 
GAAGCCAGAG ATTTACATGG TACGCAATGG GGTAGGATGT GTCCCTTTGA AACACCAGAA 
GGTCCAAATA GTGGACTAGT TAAGAATCTA GCGTTAATGG CTCAAATTGC TGTAGGAATA 
AATGAGAGGA TTGTAGAAAA AACACTTTAT GAAATGGGAG TAGTTCCAGT GGAGGAGGTC 
ATAAGAAGAG TAACGGAAGG CGGAGAGGAT CAGAATGAGT ATCTGAAATG GTCTAAGGTT 
ATACTCAATG GAAGATTAAT AGGCTATTAT CAAGATGGTG GAGAATTAGC TAATAAGATA 
AGAGAAAGAA GGAGAAAAGG AGAAATTAGT GATGAAGTAA ACGTAGGCCA TATAGTGACA 
GATTTTATTA ATGAGGTTCA TGTTAATTGT GATTCTGGAA GAGTTAGAAG ACCACTTATA 
ATTGTTTCTA ACGGTAACCC GTTGGTAACT ATTGAAGACA TTGAAAAGTT AGAATCAGGT 
GCTATTACAT TTGACGATCT TGTTAGACAA GGAAAGATAG AGTATCTAGA TGCAGAAGAA 
GAGGAGAACG CTTATGTTGC TTTAGAACCT AATGACTTAA CTCCAGATCA TACTCATTTA 
GAAATATGGT CTCCAGCTAT TTTAGGCATA ACAGCGTCTA TAATACCATA TCCAGAGCAT 
AATCAATCAC CTAGAAATAC ATACCAATCA GCTATGGCGA AACAAGCTCT AGGTCTATAT 
GCAGCAAATT ATCAATTACG TACGGACACG AGAGCACATT TACTTCATTA TCCACAAAGA 
CCTCTAGTTC AAACTAGGGC ATTAGATATT ATAGGATATA CAAATAGGCC GGCCGGAAAT 
AATGCTATAT TAGCCGTAAT GTCATTTACT GGCTACAATA TGGAAGATTC AATAATTATG 
AATAGATCCT CCGTGGAGAG GGGAATGTAT AGATCTACAT TTTTTAGGCT TTACTCAACG 
GAAGAGGTAA AATACCCTGG AGGTCAAGAA GATAAAATAG TAATGCCAGA AGCTGGTGTT 
AGAGGATATA AGGGCAAAGA ATATTACAGA CTTCTAGAGG ATAACGGAGT AGTCTCTCCA 
GAGGTCGAAG TGAAGGGAGG AGATGTTTTA ATAGGTAAAG TTAGCCCTCC AAGATTCTTA 
CAAGAATTTA AAGAATTATC TCCAGAGCAA GCTAAGCGTG ACACCTCAAT AGTTACAAGA 
CATGGTGAAA TGGGTATAGT GGATTTAGTT CTAATTACCG AAACTGCTGA GGGTAATAAG 
CTAGTTAAGG TAAGAGTAAG AGATCTTAGG ATACCAACAA TTGGCGATAA ATTCGCCAGT 
AGACATGGAC AAAAAGGCGT TATAGGTATG CTCATACCAC AAGTTGACAT GCCATATACC 
GTTAAAGGCG TTGTGCCAGA TATAATATTA AATCCTCATG CATTGCCATC TAGAATGACG 
TTAGGACAAA TTATGGAAGG AATAGCTGGT AAATATGCAG CATTATCCGG AAATATTGTA 
GATGCTACAC CTTTCTACAA GACACCTATA GAACAATTAC AAAATGAGAT TTTGAGATAC 
GGTTATCTAC CAGATGCTAC TGAAGTAGTG TATGATGGAC GTACTGGACA GAAAATTAAA 
TCTAGAATAT ACTTTGGAGT AGTCTATTAT CAGAAATTGC ATCACATGGT AGCAGATAAG 
CTTCATGCTA GAGCTAGGGG TCCAGTCCAA ATTTTAACTA GACAACCAAC AGAAGGAAGA 
GCTAGAGAAG GTGGTTTAAG ATTTGGAGAA ATGGAGAGAG ATTGCTTAAT TGGTTTTGGT 
ACTGCAATGC TTCTTAAAGA CAGGTTATTG GATAACTCTG ATAGGACAAT GATTTACGTT 
TGTGATCAGT GTGGTTATAT AGGCTGGTAC GATAAGAATA AGAATAAATA TGTATGCCCA 
ATACATGGTG ATAAGAGTAA CTTGTTCCCA GTTACTGTAT CTTACGCATT TAAGCTTTTA 
ATTCAAGAAC TAATGAGTAT GATTATCTCA CCTAGGTTAG TTTTGGAGGA TAAAGTTGGA 
TTAAGTGGAG GTTAA 

 

Protein sequence

MASNLTIDER WRVIEAYFKS KGLVRQHLDS YNDFVRNKLQ EIIDEQGEIP TEIPGLKVRL 
GKIRIGKPRV RESDRGEREI SPMEARLRNL TYAAPLWLTM IPVENNIEAE PEEVYIGDLP 
IMLKSAIDPI SQYTLDKLIE IGEDPKDPGG YFIVNGSERV IVTQEDLAPN RVLVDTGKTG 
SNITHTAKII SSTAGYRVPV TIERLKDGTF HVSFPAVPGK IPFVILMRAL GILTDRDIVY 
AVSLDPEVQN ELFPSLEQAS SIANVDDALD FIGSRVAIGQ KRENRIEKAQ QIIDKYFLPH 
LGTSAEDRKK KAYYLAYAIS KVIELYLGRR EPDDKDHYAN KRLRLAGDLF ASLFRVAFKA 
FVKDLTYQLE KSKVRGRKLA LKALVRPDIV TERIRHALAT GNWVGGRTGV SQLLDRTNWL 
SMLSHLRRVI SSLARGQPNF EARDLHGTQW GRMCPFETPE GPNSGLVKNL ALMAQIAVGI 
NERIVEKTLY EMGVVPVEEV IRRVTEGGED QNEYLKWSKV ILNGRLIGYY QDGGELANKI 
RERRRKGEIS DEVNVGHIVT DFINEVHVNC DSGRVRRPLI IVSNGNPLVT IEDIEKLESG 
AITFDDLVRQ GKIEYLDAEE EENAYVALEP NDLTPDHTHL EIWSPAILGI TASIIPYPEH 
NQSPRNTYQS AMAKQALGLY AANYQLRTDT RAHLLHYPQR PLVQTRALDI IGYTNRPAGN 
NAILAVMSFT GYNMEDSIIM NRSSVERGMY RSTFFRLYST EEVKYPGGQE DKIVMPEAGV 
RGYKGKEYYR LLEDNGVVSP EVEVKGGDVL IGKVSPPRFL QEFKELSPEQ AKRDTSIVTR 
HGEMGIVDLV LITETAEGNK LVKVRVRDLR IPTIGDKFAS RHGQKGVIGM LIPQVDMPYT 
VKGVVPDIIL NPHALPSRMT LGQIMEGIAG KYAALSGNIV DATPFYKTPI EQLQNEILRY 
GYLPDATEVV YDGRTGQKIK SRIYFGVVYY QKLHHMVADK LHARARGPVQ ILTRQPTEGR 
AREGGLRFGE MERDCLIGFG TAMLLKDRLL DNSDRTMIYV CDQCGYIGWY DKNKNKYVCP 
IHGDKSNLFP VTVSYAFKLL IQELMSMIIS PRLVLEDKVG LSGG