Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1080 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 1011963 |
End bp | 1013168 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | putative transcriptional regulator, GntR family |
Protein accession | ACX91323 |
Protein GI | 261601720 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGAGA GATTTTTATC CACCGAAACT AAGTATTTAC GTACCTCAGA AATAAGAGAT CTACTAAAAC TAACGGAAGG TAAGAATGTA ATTAGCCTTG CGGGAGGTTT ACCTGATCCT CAGACTTTTC CAGTAGAAGA AATTAAAAAA ATAGCAGATG ACATCTTATT GAATAGTGCT GATAAGGCAT TACAATATAC TGCAACTGCT GGTATATCTG AATTTAGAAG AGAATTGGTG AACTTATCTA GATTAAGGGG AATTAGTGGA ATAGATGAAA GAAACGTCTT TGTTACAGTA GGAAGTCAAG AAGCACTTTT CATGATATTT AATATATTAC TAGATCCGGG AGACAATGTA GTAGTCGAGG CGCCAACTTA TTTAGCAGCT TTAAATGCCA TGAGAACTAG AAAGCCAAAT TTCATATCGA TAACAGTAAC GGAAATGGGC CCAGATCTAG ATGAATTGGA GAGAAAAATA AAAGATGCCC ATAGCAATGG GAAGAAGGTT AAACTGATGT ATGTGATTCC AACAGCCCAG AATCCGGCGG GTACTACGAT GAATACAGAG GATAGGAAAA GACTTTTAGA GATTGCATCG AAATATGATT TCTTAATTTT TGAGGATGAT GCTTATGGGT TCTTAGTATT CGAGGGAGAA AGTCCACCAC CAATTAAAGC CTTCGATAAA GAAGGAAGAG TAATTTATAC TAGCACATTT AGTAAAATAC TTGCACCCGG TTTAAGGTTA GGATGGGTAA TTGCTCATGA AGATTTCATA AAGGAAATGG AACTATATAA ACAAAATGTT GATTTGCATA CACCTTCATT ATCACAATAT ATTGCAATGG AGGCTATAAG GAGGGGTATA ATTCAAAATA ATTTACCTAA GATAAGGAGA GTGTATAAGG AAAAAAGAGA TGTAATGCTA GAGGCTATTG AAACTTATTT CCCTAATGAT GCCAGATGGA CTAAACCAGT TGGTGGAATG TTTGTTTTTG CTTGGTTGCC ACAAAAAATA GATACTACTA AGATGTTAGA AAAAGCCTTA CAAAGGGGTG TAGCTTATGT ACCAGGTTCT AGTTTCTATG CTGACTATAG TGGAAAGAAT ACTATGAGGA TCAACTTTAG TTTTCCTAAG AAAGAAGAAT TAATAGAGGG AATTAAGAGG CTAGGAGATA CGATAAAGCA TGAGCTCTCT ACTTAA
|
Protein sequence | MFERFLSTET KYLRTSEIRD LLKLTEGKNV ISLAGGLPDP QTFPVEEIKK IADDILLNSA DKALQYTATA GISEFRRELV NLSRLRGISG IDERNVFVTV GSQEALFMIF NILLDPGDNV VVEAPTYLAA LNAMRTRKPN FISITVTEMG PDLDELERKI KDAHSNGKKV KLMYVIPTAQ NPAGTTMNTE DRKRLLEIAS KYDFLIFEDD AYGFLVFEGE SPPPIKAFDK EGRVIYTSTF SKILAPGLRL GWVIAHEDFI KEMELYKQNV DLHTPSLSQY IAMEAIRRGI IQNNLPKIRR VYKEKRDVML EAIETYFPND ARWTKPVGGM FVFAWLPQKI DTTKMLEKAL QRGVAYVPGS SFYADYSGKN TMRINFSFPK KEELIEGIKR LGDTIKHELS T
|
| |