Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0871 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 816398 |
End bp | 817297 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | protein of unknown function DUF224 cysteine-rich region domain protein |
Protein accession | ACX91117 |
Protein GI | 261601514 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0784553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAACG AAGATCAGCT CAATTTCATT AGAAAGAATC TAGTGAAATA TTTAATGGAG GATTACCTTC CATTTCCGGT AAATAGGAGT GTTTGTTACG AATGGGCTAA TGGTTTAAAT ATAAGGAGAG GAGGGGAGAC GATAATCTAC ACTGGCTGTT CCTATCAGTT GGCTGAATTG GGAAAGAGAT TTGACGAAAT TTTGCCTGCA TTATCCAAAT TTAAGGGTGT AGAAAGATTT TCGTCGATAT TGAAGGTCTT CTACAAGCCT AAGGATACAC GTTCATATAA GATTTTGAGG AATATTGCTT CAGTTCTAAA ATCTAGTGTT GATTTCGGCT ATTTATATGA GGATGAGCCC TACAGTGGTA CAATCTTACT TGAAATGGGC ATGGTGGAGG AATTTAAGGA ATACGCTAAG AAATTGGTTG AAGTTTTCGA CTCCCATGGC GTTAAGAGGA TAATTACTGT AGACCCCCAC ACTCATTATA CGCTCTTTAG GATAAAGGAA ATGCTCTCGC CATCGTGGAA TGTGGAGATT GTGAACTACT TCGAACTTAT TAAAAACGTT AAGGTTAAGG GTGAGGGTAC TTTCGTATTT CATGATTCTT GTCTTTATTC GAGGTTTCTA GGGATGAGGG ATTCCATTAG GGAAGTGATT AAGAGTAGTG GAATAGTATT GAAGGAGGAT GAGATGATAA CTGGGAAGGA AACCTCAATG TGTTGTGGGG GTCCTTTAGC CCCGATAAAT AAGGAAACCA GTGATAAGAT AGCTAGAAAT AGAGCTGAGG CATTAAAGAG TGTTCACAAT AAGGTGCTCT TAGCTTGTCC ATTCTGTTAT GCTAATCTCT CTCCTTATGT GGAGGCTTAC GATTTCGCAG AGGTGATAAG TGGTGAATGA
|
Protein sequence | MINEDQLNFI RKNLVKYLME DYLPFPVNRS VCYEWANGLN IRRGGETIIY TGCSYQLAEL GKRFDEILPA LSKFKGVERF SSILKVFYKP KDTRSYKILR NIASVLKSSV DFGYLYEDEP YSGTILLEMG MVEEFKEYAK KLVEVFDSHG VKRIITVDPH THYTLFRIKE MLSPSWNVEI VNYFELIKNV KVKGEGTFVF HDSCLYSRFL GMRDSIREVI KSSGIVLKED EMITGKETSM CCGGPLAPIN KETSDKIARN RAEALKSVHN KVLLACPFCY ANLSPYVEAY DFAEVISGE
|
| |