Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0400 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 360035 |
End bp | 360550 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | Protein of unknown function DUF429 |
Protein accession | ACX90683 |
Protein GI | 261601080 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00365884 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTGTG GAATCGATCT GGCAGTAAGA AGAAAGACTG CAGTAGCAAT ACTCATAGAC AACGAGATAA AAATCATCGA ACTAGTAACA AACGAGGAAA TTATTGAAAG TTGTAAGGTA GCGAAAATTA CTGCCATAGA TTCTCCTCTT TCTTATCACA ACGGTTTTAG AAATGTAGAT AAGGAAATGA TAAAAAGAAA ACTGAGGGTA TTGCCTCCAT CCTTCATGAA AACCCTCGTG CAAAGGGCTA TCCAATTGAA GGAAAAATTA TATAATGTAA TTGAGACTCA TCCAACATCT TCCATGAAGA TTGTAGGTTT GAATTGGAAA GACTTACATG AAATTAAGGA TTATGTGGAT GCTGCATTGT GTGCAATGGC TGCTATGGCT TACGATTTAG GATACGCAGA GGAAATAAGA GCTGATGATG GGATTATTTA CCTGGTATCT AAAAGATTTC CTTTTGAACT AAAAAGAAAA AATTACTTTG AGTTCTACTT GAAAGGACCT AAATGA
|
Protein sequence | MYCGIDLAVR RKTAVAILID NEIKIIELVT NEEIIESCKV AKITAIDSPL SYHNGFRNVD KEMIKRKLRV LPPSFMKTLV QRAIQLKEKL YNVIETHPTS SMKIVGLNWK DLHEIKDYVD AALCAMAAMA YDLGYAEEIR ADDGIIYLVS KRFPFELKRK NYFEFYLKGP K
|
| |