Gene Ssol_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0400 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp360035 
End bp360550 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content35% 
IMG OID 
ProductProtein of unknown function DUF429 
Protein accessionACX90683 
Protein GI261601080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00365884 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTGTG GAATCGATCT GGCAGTAAGA AGAAAGACTG CAGTAGCAAT ACTCATAGAC 
AACGAGATAA AAATCATCGA ACTAGTAACA AACGAGGAAA TTATTGAAAG TTGTAAGGTA
GCGAAAATTA CTGCCATAGA TTCTCCTCTT TCTTATCACA ACGGTTTTAG AAATGTAGAT
AAGGAAATGA TAAAAAGAAA ACTGAGGGTA TTGCCTCCAT CCTTCATGAA AACCCTCGTG
CAAAGGGCTA TCCAATTGAA GGAAAAATTA TATAATGTAA TTGAGACTCA TCCAACATCT
TCCATGAAGA TTGTAGGTTT GAATTGGAAA GACTTACATG AAATTAAGGA TTATGTGGAT
GCTGCATTGT GTGCAATGGC TGCTATGGCT TACGATTTAG GATACGCAGA GGAAATAAGA
GCTGATGATG GGATTATTTA CCTGGTATCT AAAAGATTTC CTTTTGAACT AAAAAGAAAA
AATTACTTTG AGTTCTACTT GAAAGGACCT AAATGA
 
Protein sequence
MYCGIDLAVR RKTAVAILID NEIKIIELVT NEEIIESCKV AKITAIDSPL SYHNGFRNVD 
KEMIKRKLRV LPPSFMKTLV QRAIQLKEKL YNVIETHPTS SMKIVGLNWK DLHEIKDYVD
AALCAMAAMA YDLGYAEEIR ADDGIIYLVS KRFPFELKRK NYFEFYLKGP K