Gene Ssol_0321 details

Gene Information

• Locus tag: Ssol_0321
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: -
• Start bp: 279495
• End bp: 281486
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 38%
• Product: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
• Protein accession: ACX90613
• Protein GI: 261601010

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.468082
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTAG AAGATATTAA AAAGATTCTC GTAGTAGGAG CAGGAACAAT GGGACACGGA 
ATAGCTGAAA TTGCTGCAAT TTCTGGGTAT AAGGTGTACT TAAGTGATAT ATCTCAAGAT 
ATATTAAACA ATGCTTTGGA AAGAATAAGA TGGAGTTTAA GTAAGTTACA AGAGAGAGGG 
CAGATAAAAG AAAGTGTTGA TACCATAATG TCTAGAATAA CCACTATAGT GGGATTAGAT 
AAGACAGTAA GTGATGCTGA CTTCTCTATA GAGGCTTCGA CTGAAAGAAT GGATATAAAA 
AGGCAAGTTT TCTCAAAACT TGACGAATTA TTACCACCCC ATGCAATATT AGCTACAAAT 
ACGAGTAGTC TACCAATATC TAAAATAGCT GAAGCTACTA AAAGACAAGA TAAAGTTGTG 
GGAATGCACT TCTTCAACCC GCCAGTACTA ATGCAACTTG TAGAAGTAAT GAAAGGAGAT 
AAAACTAGTG ATGAGACTGC AAAAATAACT TATGATTTAG CCAAGAAGTT TGGCAAACAA 
CCAATAATGA TAAATAAGGA TGTGCCAGGT TATGTCGTAA ATAGAATATT AGGTCAAATA 
AATATCGCCT CATGCATATT AGTGGAGAAG AAAGTAGCAG ACTACAGAGA AGTTGATGCA 
GTAGCTAGAT ACAAACTAGG GTTTCCAATG GGGGTATTTG AATTAATAGA CTATACAGGG 
GTAGATGTTG CGTACTACGT TTCGAAGTCT AGAGAAGAAC TAGGAATAAG AGATGATATA 
CCGATATGCA GTCTGATAGA GCAAAAGTTT AAGAATAACG AACTAGGTGT GAAAACTGGT 
AAAGGTTTCT ACACTTATCC AGCTCCAGGC AAATATGTTA AACCGGAATT GCCTAAGGAA 
TTAGCTGATA AATTAAACCC AGCATTAATT TTAGCTGGAG GCGTAAATGA GGCTACTAGA 
CTATTGAGAG AAGGAATAGC AAGTAGGGAT GATATAGATT TAGGTGTGAG ATTGGGATTA 
GGGCTTCCAA AGGGAATATT CCAATATGCG GATGAGTTAG GAGTTGATAC AGTACTTAAG 
GCTTTGGAAG ATCTAAAAGC GTTATCTGGT TATAACACCT TCAATCCAGA TCCCATGATA 
ACTCAAATGA TAAGAGAGAA TAAGTTAGGA ATAAAGACGG GAAGTGGATT CTACCAGTAT 
GGGAAGGTCG AGGAAAAGAA AATGAACACC CTTATCATAC GTATTGAACC ACCGCTAGCG 
TGGATCATAC TAAATAGACC AGAACGATTG AACGCACTAA ATCCAGAGTT AGTAAGTGAA 
CTTGACAAGA GTCTAGATGA ATTAGAAAGT AGAAGTGATG TAAGGGTAGT CATAATTACT 
GGTAACGGTA GGGCTTTCTC AGCTGGGGCA GACGTTAGCT CGTTCATTAC GCTAAGACCA 
ATAGACGTGA TAAGGTTGAG GACTTTAAGA AATGTTGTGA ACAAAATTGC TCTCTACACT 
AAGCCGATAA TTGCGGGAAT AAATGGGTTT GCATTAGGTG GTGGACTTGA GTTGGCCATG 
GCTTGTGATA TAAGGATAGC TTCTGAGGTT GCACAACTAG GACAACCGGA AATCAATATA 
GGTATAATAC CCGGAGCTGG GGGAACGCAG AGGCTACCCA GACTAGTTGG AAAAGGAAAG 
GCTAAGTTAA TGATATATAC CGGTGATATG GTTTCCGCTG AGGATGCGTA TAAGATGGGA 
TTAGTGGATT TAGTAGTTCC AAGTAATAGA TTTGAGGAAG AAGTAAGAAG AGTAGCATTG 
AAAATAGCTG AAAAATCACC AATATCACTA TTGGCAGCTA AATTAGCAAT AGAGTTAGGA 
TACGAATCTA ATATCTGGAC TGGACAAACT CTAGAGTCAA CATTATTTGG GCTTTTATTC 
ACAACTAAAG ATGTAGAAGA AGGAGTGAAA GCTTTCTTAG AAAAAAGAAA ACCCCAATTT 
AAAGGAGAAT AA 

 

Protein sequence

MKVEDIKKIL VVGAGTMGHG IAEIAAISGY KVYLSDISQD ILNNALERIR WSLSKLQERG 
QIKESVDTIM SRITTIVGLD KTVSDADFSI EASTERMDIK RQVFSKLDEL LPPHAILATN 
TSSLPISKIA EATKRQDKVV GMHFFNPPVL MQLVEVMKGD KTSDETAKIT YDLAKKFGKQ 
PIMINKDVPG YVVNRILGQI NIASCILVEK KVADYREVDA VARYKLGFPM GVFELIDYTG 
VDVAYYVSKS REELGIRDDI PICSLIEQKF KNNELGVKTG KGFYTYPAPG KYVKPELPKE 
LADKLNPALI LAGGVNEATR LLREGIASRD DIDLGVRLGL GLPKGIFQYA DELGVDTVLK 
ALEDLKALSG YNTFNPDPMI TQMIRENKLG IKTGSGFYQY GKVEEKKMNT LIIRIEPPLA 
WIILNRPERL NALNPELVSE LDKSLDELES RSDVRVVIIT GNGRAFSAGA DVSSFITLRP 
IDVIRLRTLR NVVNKIALYT KPIIAGINGF ALGGGLELAM ACDIRIASEV AQLGQPEINI 
GIIPGAGGTQ RLPRLVGKGK AKLMIYTGDM VSAEDAYKMG LVDLVVPSNR FEEEVRRVAL 
KIAEKSPISL LAAKLAIELG YESNIWTGQT LESTLFGLLF TTKDVEEGVK AFLEKRKPQF 
KGE