Gene Ssol_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0170 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp145224 
End bp146924 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content39% 
IMG OID 
Productsuccinate dehydrogenase or fumarate reductase, flavoprotein subunit 
Protein accessionACX90466 
Protein GI261600863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA TCGAATACGA CGCTGTTGTA ATTGGAGGAG GACTAGCAGG ATTAATGAGT 
GCACATGAGA TAGCCTCTGC TGGTTTTAAA GTTGCTGTTA TTTCAAAGGT ATTTCCCACG
AGATCGCATT CTGCAGCAGC AGAAGGTGGA ATAGCAGCCT ATATTCCTGG GAATTCAGAT
CCAAATGATA ACCCAGATTA TATGACATAC GATACAGTTA AAGGCGGAGA TTATTTAGTT
GATCAAGATG CAGCGGAATT ACTTTCCAAC AAATCTGGAG AAATAGTAAT GTTACTAGAA
AGATGGGGTG CACTATTCAA TAGGCAACCG GATGGCAGAG TTGCAGTCAG GTATTTTGGA
GGACAGACCT ATCCGAGAAC TAGATTTGTT GGAGACAAAA CTGGAATGGC ACTGTTACAT
ACACTTTTCG AAAGGACTTC TGGTTTAAAT GTAGATTTTT ACAACGAGTG GTTCTCTTTA
GACTTAGTTA CTGATGATAA GAAGGTAGCT GGTATAGTGG CAATGCAAAT GAAGACATTA
ACTCCATTCT TCTTTAAGAC TAAGGCTGTC GTATTAGCGA CTGGAGGAAT GGGAATGTTA
TATAGACATA CAACAAATAG CTACATCAAT ACTGGCGATG GCTTTGGCAT AGCATTAAGA
GCTGGAGCTG CATTAAAAGA TCCAGAATTT GTACAATTTC ATCCAACAGC ACTCTACCCA
TCAGACGTTT TAATTAGTGA GGCTGCTAGA GGTGAAGGAG CTATATTGAA AAATATAAAA
GGAGAAAGAT TTATGACGAG ATATGCTCCT AAAAAGCTAG ATCTAGCACC TAGGGATATA
GTTTCAAGAG CAATAATTAC TGAAATAAAA GAGGGAAGAG GATTCCCTGG TGGGTATGTT
GGTCTGGATT TGACTCATTT AGGTGAAGAA TACATCAAAG AGAGATTAGC TTTAGCTGTG
GAAGCGGCAA AAAGCTTTGC AGGTGTTGAT GCGTTTACTG AACCTATTCC AGTAAGACCT
GCTCAACATT ATTATATGGG AGGAATAGAC GTGGATATAG AGGGTAGGAA CCCTGATATT
GTGGGGCTAT TCTCTGCAGG TGAAGCAGCT TGTGTATCAG TACATGGTGC TAATAGATTA
GGTTCTAATT CACTTCTGGA TACTTTAGTA TTCGGTCAAG TTACGGGTAG GGCTGTGGTT
CAATTTCTCA AGTCTAATTC AAGTAATCCC ACATCAAATT ATGAGAAAGA AGCTGAGAAA
GTTGTTGATG ATGCTTATAA GTTAGTAAAA AGTGAGAGTG GCGTGCATTT TGGTCAAATA
CTAGAAAAAC TAAGAGACAC GATGTGGGAT TATGTGGGAA TATATAGAGA TGAGGGTGGA
CTACTTAATG CGATGTCTGA GATAAACAAA TTAAGAGGTA TGATTAGCAA TATGTATGTG
ACAGATAAGA GTAAAGTCTA TAACACAGAA TTCTTTAACG CCCTAGAATT GAGGAATATG
TTAGATTTAG CATTCGTAAT AGCTAAATCA GCTTTAGAAA GAAAAGAGTC AAGAGGAGCG
CATTATAGAA CGGATTATCC GGATAGGGAT GATAATAATT GGTTAAAACA CACAATTGCG
TATTTAAGGG GTAATACGGT TGAGGTTACA TTCAAACCAG TTAAGATAAC CAGATGGAAA
CCAGAACCTA GGGTGTATTA A
 
Protein sequence
MEKIEYDAVV IGGGLAGLMS AHEIASAGFK VAVISKVFPT RSHSAAAEGG IAAYIPGNSD 
PNDNPDYMTY DTVKGGDYLV DQDAAELLSN KSGEIVMLLE RWGALFNRQP DGRVAVRYFG
GQTYPRTRFV GDKTGMALLH TLFERTSGLN VDFYNEWFSL DLVTDDKKVA GIVAMQMKTL
TPFFFKTKAV VLATGGMGML YRHTTNSYIN TGDGFGIALR AGAALKDPEF VQFHPTALYP
SDVLISEAAR GEGAILKNIK GERFMTRYAP KKLDLAPRDI VSRAIITEIK EGRGFPGGYV
GLDLTHLGEE YIKERLALAV EAAKSFAGVD AFTEPIPVRP AQHYYMGGID VDIEGRNPDI
VGLFSAGEAA CVSVHGANRL GSNSLLDTLV FGQVTGRAVV QFLKSNSSNP TSNYEKEAEK
VVDDAYKLVK SESGVHFGQI LEKLRDTMWD YVGIYRDEGG LLNAMSEINK LRGMISNMYV
TDKSKVYNTE FFNALELRNM LDLAFVIAKS ALERKESRGA HYRTDYPDRD DNNWLKHTIA
YLRGNTVEVT FKPVKITRWK PEPRVY