Gene Ssol_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0128 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp111341 
End bp112882 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content35% 
IMG OID 
Producttype II secretion system protein E 
Protein accessionACX90427 
Protein GI261600824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.510633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTA TTGAAGATTA CTTATCTAGA TTTCCGGAAA AACCAGTAAT GATTGATGAC 
CCGAATAAAC TGAAAGGTAG TAAGAATTAT AATGCAATTT ATAAAGTAGA TAAATACATT
TACATTCATG TTCAGAGTAC AAAGGCAGAG GATGGTTATA ACCAATATAC GGTGATAGAA
CCTCCGAGAC CGAAACCTAA AGAAATAGAA GAAATAGAGG AGAAATTCGC AAAAACCATT
GGTAATACAG AGCCACCACC TACTGTCGAA GAAAAGGAGA TACTTATGAG GAGAGTTTTA
GATAAAATAC TAACTAAGAT AAGAATATCT GTACCAAAGG AATACGCAAT TTATCATTTC
GTAAGAGATA AATTATATTC AGGCATATTA GAGCCATTAA TTAGGGATCC ATTTATCGAG
GATATATCGA TTCCAGGCTT AGGTCACATT TACATTGTGC ACAAGGTATT CGGCCCTATG
AGGACATCAT TATTAATTGA GAATGAAGAG GAGCTAGACA ATCTAATAAT TTCTTTAAGC
GAGAAAACAT ATAGACCAGT ATCTCATAAC AGGCCAATAA TTGATGCAAG CTTGCCAGAT
GGATCAAGAG TTAACTTCGT TTATGGAATT GATATAAGTA GAAGAGGTTC TAATTTAACT
GTAAGAAAAA TCAGTAAAAT ACCAATCAGT GTAACTCAGT TAATCTCCTT CGGTACATTG
TCTCCACTTC TTGCAGCATA TATATGGATG ATGTTAGACG AGGGAATGAA CTTGTTCGTA
TGCGGAGAAA CTGCCTCCGG AAAGACAACT ACCCTCAACG CAATTACTGC TTTCATCCCT
CCAAATTTAA AAATAGTAAC AATAGAAGAT ACTCCAGAAC TTACAGTACC GCACTCTAAT
TGGGTAGCAG AAGTTACTAG AGAAACAGGT GGTGAGGGAA GTGTAAAATT ATTCGACTTA
CTTAAAGCTG CTTTAAGGCA AAGACCTAAT TATATTTTAG TAGGCGAGAT AAGAGATAAG
GAAGGGAACG TAGCATTCCA AGCAATGCAG ACTGGTCATT CAGTTATGGC AACCTTTCAT
GCAGCAAATA TAAGAACGCT TGTACAAAGG CTTACTGGTT ATCCTATAGA GGTGCCTAAA
AGTTATATTA ATAACCTTAA TATAGCACTA TTTCAGACCG CACTATACGA TAAAAAAGGC
AATTTAATAA GAAGAGTGGT TGAAGTTGAC GAAATAATTG ATATAGATCC TGTTACTAAT
GACGTAGTTT ATATACCAGC ATTCACATAT GATCCTACAG AAGATAAGAT AATCTTTGCC
GGAAGAGGAT CTTCTTACCT TATAGAAAAT AAGGTCGCAA TCAGGAGAGG AATCGAACGT
AGAAATATAG GGATTCTTTA CGACGAATTA AACTTAAGAG CTGAATTTCT AAAAATACTC
CTAAGTAAAA AAATTTTTAA TTATTTTGAA GTATGGAATC AAATATTAAG GGCGAGACAA
TTTGGTATAG AGGAGGAGAT AAGATATGCT AAGAATATTT AG
 
Protein sequence
MSFIEDYLSR FPEKPVMIDD PNKLKGSKNY NAIYKVDKYI YIHVQSTKAE DGYNQYTVIE 
PPRPKPKEIE EIEEKFAKTI GNTEPPPTVE EKEILMRRVL DKILTKIRIS VPKEYAIYHF
VRDKLYSGIL EPLIRDPFIE DISIPGLGHI YIVHKVFGPM RTSLLIENEE ELDNLIISLS
EKTYRPVSHN RPIIDASLPD GSRVNFVYGI DISRRGSNLT VRKISKIPIS VTQLISFGTL
SPLLAAYIWM MLDEGMNLFV CGETASGKTT TLNAITAFIP PNLKIVTIED TPELTVPHSN
WVAEVTRETG GEGSVKLFDL LKAALRQRPN YILVGEIRDK EGNVAFQAMQ TGHSVMATFH
AANIRTLVQR LTGYPIEVPK SYINNLNIAL FQTALYDKKG NLIRRVVEVD EIIDIDPVTN
DVVYIPAFTY DPTEDKIIFA GRGSSYLIEN KVAIRRGIER RNIGILYDEL NLRAEFLKIL
LSKKIFNYFE VWNQILRARQ FGIEEEIRYA KNI