Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0128 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 111341 |
End bp | 112882 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | type II secretion system protein E |
Protein accession | ACX90427 |
Protein GI | 261600824 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.510633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTTA TTGAAGATTA CTTATCTAGA TTTCCGGAAA AACCAGTAAT GATTGATGAC CCGAATAAAC TGAAAGGTAG TAAGAATTAT AATGCAATTT ATAAAGTAGA TAAATACATT TACATTCATG TTCAGAGTAC AAAGGCAGAG GATGGTTATA ACCAATATAC GGTGATAGAA CCTCCGAGAC CGAAACCTAA AGAAATAGAA GAAATAGAGG AGAAATTCGC AAAAACCATT GGTAATACAG AGCCACCACC TACTGTCGAA GAAAAGGAGA TACTTATGAG GAGAGTTTTA GATAAAATAC TAACTAAGAT AAGAATATCT GTACCAAAGG AATACGCAAT TTATCATTTC GTAAGAGATA AATTATATTC AGGCATATTA GAGCCATTAA TTAGGGATCC ATTTATCGAG GATATATCGA TTCCAGGCTT AGGTCACATT TACATTGTGC ACAAGGTATT CGGCCCTATG AGGACATCAT TATTAATTGA GAATGAAGAG GAGCTAGACA ATCTAATAAT TTCTTTAAGC GAGAAAACAT ATAGACCAGT ATCTCATAAC AGGCCAATAA TTGATGCAAG CTTGCCAGAT GGATCAAGAG TTAACTTCGT TTATGGAATT GATATAAGTA GAAGAGGTTC TAATTTAACT GTAAGAAAAA TCAGTAAAAT ACCAATCAGT GTAACTCAGT TAATCTCCTT CGGTACATTG TCTCCACTTC TTGCAGCATA TATATGGATG ATGTTAGACG AGGGAATGAA CTTGTTCGTA TGCGGAGAAA CTGCCTCCGG AAAGACAACT ACCCTCAACG CAATTACTGC TTTCATCCCT CCAAATTTAA AAATAGTAAC AATAGAAGAT ACTCCAGAAC TTACAGTACC GCACTCTAAT TGGGTAGCAG AAGTTACTAG AGAAACAGGT GGTGAGGGAA GTGTAAAATT ATTCGACTTA CTTAAAGCTG CTTTAAGGCA AAGACCTAAT TATATTTTAG TAGGCGAGAT AAGAGATAAG GAAGGGAACG TAGCATTCCA AGCAATGCAG ACTGGTCATT CAGTTATGGC AACCTTTCAT GCAGCAAATA TAAGAACGCT TGTACAAAGG CTTACTGGTT ATCCTATAGA GGTGCCTAAA AGTTATATTA ATAACCTTAA TATAGCACTA TTTCAGACCG CACTATACGA TAAAAAAGGC AATTTAATAA GAAGAGTGGT TGAAGTTGAC GAAATAATTG ATATAGATCC TGTTACTAAT GACGTAGTTT ATATACCAGC ATTCACATAT GATCCTACAG AAGATAAGAT AATCTTTGCC GGAAGAGGAT CTTCTTACCT TATAGAAAAT AAGGTCGCAA TCAGGAGAGG AATCGAACGT AGAAATATAG GGATTCTTTA CGACGAATTA AACTTAAGAG CTGAATTTCT AAAAATACTC CTAAGTAAAA AAATTTTTAA TTATTTTGAA GTATGGAATC AAATATTAAG GGCGAGACAA TTTGGTATAG AGGAGGAGAT AAGATATGCT AAGAATATTT AG
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Protein sequence | MSFIEDYLSR FPEKPVMIDD PNKLKGSKNY NAIYKVDKYI YIHVQSTKAE DGYNQYTVIE PPRPKPKEIE EIEEKFAKTI GNTEPPPTVE EKEILMRRVL DKILTKIRIS VPKEYAIYHF VRDKLYSGIL EPLIRDPFIE DISIPGLGHI YIVHKVFGPM RTSLLIENEE ELDNLIISLS EKTYRPVSHN RPIIDASLPD GSRVNFVYGI DISRRGSNLT VRKISKIPIS VTQLISFGTL SPLLAAYIWM MLDEGMNLFV CGETASGKTT TLNAITAFIP PNLKIVTIED TPELTVPHSN WVAEVTRETG GEGSVKLFDL LKAALRQRPN YILVGEIRDK EGNVAFQAMQ TGHSVMATFH AANIRTLVQR LTGYPIEVPK SYINNLNIAL FQTALYDKKG NLIRRVVEVD EIIDIDPVTN DVVYIPAFTY DPTEDKIIFA GRGSSYLIEN KVAIRRGIER RNIGILYDEL NLRAEFLKIL LSKKIFNYFE VWNQILRARQ FGIEEEIRYA KNI
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