Gene Ssol_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0054 
Symbol 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand+ 
Start bp44921 
End bp45637 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content35% 
IMG OID 
ProductProtein of unknown function DUF516 
Protein accessionACX90359 
Protein GI261600756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0283934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTA AGCTAGTTTA TTCTACTTTG GATCCCGTAG GTGTGACGAT AAAGAAATTG 
GGATATCGAT TCGAGGAAAT AAATGAGGAT GTAACTGATT TTCACTATGA GAATGGAGAA 
GCCATAGTAA TCTTTTCCAG ACATGAAAGT AAAGCAGGTA TTCCCTCACT TACCGTACAT 
TATCCCGGAA ATCCATCTGA AGAAATTATG GGTGGAGAAC CTAAAAAGCT TGGAATAGCG 
TATCCTAGGC TACTTACCTC AATTTTAAGG GAAATTAAAA AGATCGATCT GAATATAGAG 
AAAACCATGG AAGCTACTCA TCATGGCCCC ACCTATCAAA ATGTTCCAGT TATATTTGTG 
GAAGTAGGAA GTAATGAGAC GTATTGGACT AACGACACAA TAGTTAAAGC GCTAGTTGAT 
TCAACTATAA GAAGTATTGA TAAGGTAGAT GAGATAGATT GTGAATATTA TATTTCAGGT 
TTTGGTGGAC CTCACTATTC TAGGCTTTTT ACTAAGCTAG CTGACGAGAG TTGCATAGGC 
CATGTGATTT CTAAGCACTA TATTGATAAG TTAGATGATA AAGTTATAAT TCAAACTATA 
ACCAACTCAG TGAATACCAT TAATAAAGTC GTAATCGATA GCTTAAACTC TAAGCAGAAA 
GAACGAATTA TAGCTTCACT AAAAAAATTA AATAATATTA ATATCGAGTT TCGATAG
 
Protein sequence
MDIKLVYSTL DPVGVTIKKL GYRFEEINED VTDFHYENGE AIVIFSRHES KAGIPSLTVH 
YPGNPSEEIM GGEPKKLGIA YPRLLTSILR EIKKIDLNIE KTMEATHHGP TYQNVPVIFV 
EVGSNETYWT NDTIVKALVD STIRSIDKVD EIDCEYYISG FGGPHYSRLF TKLADESCIG 
HVISKHYIDK LDDKVIIQTI TNSVNTINKV VIDSLNSKQK ERIIASLKKL NNINIEFR