Gene Ssol_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0024 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp22434 
End bp23153 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content37% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionACX90329 
Protein GI261600726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGGT TAGATAATAA GAAAGTAGCT ATTATAGGTG TAAGCGAAGG TTTAGGTTAT 
GCTGTAGCTT ATTTTGCATT AAAAGAGGGT GCGCAAGTTT GTATAAATGC GAGGAATGAG
AACAAGCTAA AGAAAATGAA GGAGACTCTA AGTAAGTATG GTAATATCCA GTATGTAGTT
GGTGATGTCT CTAATATTGA AGGTGCTAGG AATGTATTAG ATAAGTGTGC ATCTTTTCTT
AACGGAATAG ATCATTTAGT TGTTACTGTT GGAGGATATA TTGAGGACAC AATAGATCAT
TTTAGTGGAT TAGAAGAGAT GTTGACTAAT CACATAAAGA TTCCTCTTTA TGTAATCAAT
TCATCTCTAA GGTTTCTTAG GGAAGGTTCC AGTGTAGTTT TAGTATCATC AATGAGTGGT
ATTGGTAAAG CATCCCCTGA CCAATTATCT TATGCAGTAG CTAAAGCGGG TCTAGCTAAG
GAGGTCGAAA TTATAGCCTC TGAATTATTA GGTAAGGGTA TCAGAGTTAA CGGTATTGCT
CCAACTACTA TAGGTGGAGA ATTTGAACCT GAAAGAAATT GGAAGAAGCT TAGAAAATTA
GGTGATGATA TGGCTCCTCC AGAGGATTTC GCTAAGGTTA TTATTTGGCT TTTAACTGAC
GAATCGGAAT GGGTAGATGG AGTTGTAATA CCAGTTCATG GTGGCGCAAG GCTAAAATAG
 
Protein sequence
MGRLDNKKVA IIGVSEGLGY AVAYFALKEG AQVCINARNE NKLKKMKETL SKYGNIQYVV 
GDVSNIEGAR NVLDKCASFL NGIDHLVVTV GGYIEDTIDH FSGLEEMLTN HIKIPLYVIN
SSLRFLREGS SVVLVSSMSG IGKASPDQLS YAVAKAGLAK EVEIIASELL GKGIRVNGIA
PTTIGGEFEP ERNWKKLRKL GDDMAPPEDF AKVIIWLLTD ESEWVDGVVI PVHGGARLK