| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_4221 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 4583376 |
|---|
| End bp | 4584872 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | ATPase associated with various cellular activities AAA_5 |
|---|
| Protein accession | ACX41819 |
|---|
| Protein GI | 260451397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCACC CTCATTTATT AGCGGAAAGA ATTTCCCGCC TGAGCAGTTC GTTGGAAAAG
GGGCTTTATG AACGTAGCCA CGCCATCCGC TTGTGTTTAT TAGCGGCATT AAGTGGTGAA
AGTGTGTTCC TCCTTGGCCC GCCAGGTATT GCCAAAAGTT TGATCGCCCG GCGCTTAAAA
TTCGCCTTTC AGAATGCCCG CGCGTTTGAA TATCTGATGA CCCGCTTCTC CACGCCGGAA
GAAGTTTTTG GTCCCCTTTC TATTCAGGCG CTAAAAGATG AAGGGCGCTA TGAACGTTTA
ACCAGCGGTT ACCTGCCGGA AGCAGAAATT GTCTTTCTGG ATGAGATCTG GAAAGCGGGC
CCGGCAATTC TTAATACCTT GCTCACCGCC ATTAACGAGC GCCAGTTCCG CAACGGTGCA
CACGTAGAAA AAATCCCGAT GCGTCTGCTG GTGGCGGCCT CCAACGAGCT GCCGGAAGCA
GACAGCAGTC TGGAAGCGTT ATATGACCGC ATGCTGATTC GTCTGTGGTT AGATAAAGTG
CAGGATAAAG CGAATTTCCG CTCCATGCTG ACCAGTCAAC AGGATGAAAA CGACAATCCG
GTTCCTGATG CCTTGCAGGT CACAGATGAA GAATATGAAC GCTGGCAGAA AGAGATTGGT
GAAATTACGC TGCCCGATCA TGTATTTGAG CTGATTTTTA TGCTGCGCCA GCAACTGGAT
AAATTACCGG ATGCGCCTTA TGTCTCGGAT CGTCGCTGGA AAAAAGCGAT CCGATTATTG
CAGGCCAGCG CCTTTTTTAG CGGTCGCAGT GCTGTTGCCC CGGTAGATCT CATTTTGCTG
AAAGATTGCC TGTGGTATGA CGCGCAAAGC CTGAATTTGA TACAACAACA AATTGATGTA
TTGATGACCG GTCACGCCTG GCAACAGCAA GGGATGTTGA CTCGCCTTGG CGCGATTGTG
CAACGTCACC TGCAACTCCA GCAGCAACAA AGCGATAAAA CAGCCTTAAC GGTAATTCGT
CTGGGCGGCA TTTTCAGCCG TCGTCAGCAG TATCAACTTC CTGTTAACGT TACTGCTTCC
ACTCTGACTC TACTGCTGCA AAAACCGTTA AAACTGCATG ATATGGAAGT GGTTCATATC
TCCTTTGAGC GTAGCGCGCT GGAACAGTGG CTGAGCAAAG GTGGTGAAAT TCGCGGTAAA
CTGAACGGTA TCGGCTTTGC CCAGAAACTG AATCTGGAAG TTGATAGCGC CCAACATCTT
GTCGTTCGCG ATGTAAGTTT ACAAGGCAGT ACGCTGGCAC TTCCCGGTTC ATCGGCTGAA
GGTCTGCCTG GTGAAATAAA ACAACAACTG GAAGAGCTTG AAAGCGACTG GCGCAAGCAA
CACGCTTTAT TCAGCGAACA GCAAAAATGT CTGTTTATCC CTGGCGACTG GTTAGGTCGC
ATTGAAGCCA GCCTACAGGA TGTCGGTGCA CAGATTCGCC AGGCACAACA ATGCTAA
|
|---|
| Protein sequence | MAHPHLLAER ISRLSSSLEK GLYERSHAIR LCLLAALSGE SVFLLGPPGI AKSLIARRLK
FAFQNARAFE YLMTRFSTPE EVFGPLSIQA LKDEGRYERL TSGYLPEAEI VFLDEIWKAG
PAILNTLLTA INERQFRNGA HVEKIPMRLL VAASNELPEA DSSLEALYDR MLIRLWLDKV
QDKANFRSML TSQQDENDNP VPDALQVTDE EYERWQKEIG EITLPDHVFE LIFMLRQQLD
KLPDAPYVSD RRWKKAIRLL QASAFFSGRS AVAPVDLILL KDCLWYDAQS LNLIQQQIDV
LMTGHAWQQQ GMLTRLGAIV QRHLQLQQQQ SDKTALTVIR LGGIFSRRQQ YQLPVNVTAS
TLTLLLQKPL KLHDMEVVHI SFERSALEQW LSKGGEIRGK LNGIGFAQKL NLEVDSAQHL
VVRDVSLQGS TLALPGSSAE GLPGEIKQQL EELESDWRKQ HALFSEQQKC LFIPGDWLGR
IEASLQDVGA QIRQAQQC
|
|---|
| |