Gene EcDH1_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4072 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4408800 
End bp4409498 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content51% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionACX41672 
Protein GI260451250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.476785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA TCCTGTTAGT TGATGATGAC CGAGAGCTGA CTTCCCTATT AAAGGAGCTG 
CTCGAGATGG AAGGCTTCAA CGTGATTGTT GCCCACGATG GGGAACAGGC GCTTGATCTT
CTGGACGACA GCATTGATTT ACTTTTGCTT GACGTAATGA TGCCGAAGAA AAATGGTATC
GACACATTAA AAGCACTTCG CCAGACACAC CAGACGCCTG TCATTATGTT GACGGCGCGC
GGCAGTGAAC TTGATCGCGT TCTCGGCCTT GAGCTGGGCG CAGATGACTA TCTCCCGAAA
CCGTTTAATG ATCGTGAGCT GGTGGCACGT ATTCGCGCGA TCCTGCGCCG TTCGCACTGG
AGCGAGCAAC AGCAAAACAA CGACAACGGT TCACCGACAC TGGAAGTTGA TGCCTTAGTG
CTGAATCCAG GCCGTCAGGA AGCCAGCTTC GACGGGCAAA CGCTGGAGTT AACCGGTACT
GAGTTTACCC TGCTCTATTT GCTGGCACAG CATCTGGGTC AGGTGGTTTC CCGTGAACAT
TTAAGCCAGG AAGTGTTGGG CAAACGCCTG ACGCCTTTCG ACCGCGCTAT TGATATGCAC
ATTTCCAACC TGCGTCGTAA ACTGCCGGAT CGTAAAGATG GTCACCCGTG GTTTAAAACC
TTGCGTGGTC GCGGCTATCT GATGGTTTCT GCTTCATGA
 
Protein sequence
MNKILLVDDD RELTSLLKEL LEMEGFNVIV AHDGEQALDL LDDSIDLLLL DVMMPKKNGI 
DTLKALRQTH QTPVIMLTAR GSELDRVLGL ELGADDYLPK PFNDRELVAR IRAILRRSHW
SEQQQNNDNG SPTLEVDALV LNPGRQEASF DGQTLELTGT EFTLLYLLAQ HLGQVVSREH
LSQEVLGKRL TPFDRAIDMH ISNLRRKLPD RKDGHPWFKT LRGRGYLMVS AS