Gene EcDH1_4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4053 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4392183 
End bp4392713 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content53% 
IMG OID 
Product20S proteasome A and B subunits 
Protein accessionACX41653 
Protein GI260451231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAACTA TAGTAAGCGT ACGCCGTAAC GGCCATGTGG TCATCGCTGG TGATGGTCAG 
GCCACGTTGG GCAATACCGT AATGAAAGGC AACGTGAAAA AGGTCCGCCG TCTGTACAAC
GACAAAGTCA TCGCGGGCTT TGCGGGCGGT ACTGCGGATG CTTTTACGCT GTTCGAACTG
TTTGAACGTA AACTGGAAAT GCATCAGGGC CATCTGGTCA AAGCCGCCGT TGAGCTGGCA
AAAGACTGGC GTACCGATCG CATGCTGCGC AAACTTGAAG CACTGCTGGC AGTCGCGGAT
GAAACTGCAT CGCTTATCAT CACCGGTAAC GGTGACGTGG TGCAGCCAGA AAACGATCTT
ATTGCTATCG GCTCCGGCGG CCCTTACGCC CAGGCTGCGG CGCGCGCGCT GTTAGAAAAC
ACTGAACTTA GCGCCCGTGA AATTGCTGAA AAGGCGTTGG ATATTGCAGG CGACATTTGC
ATCTATACCA ACCATTTCCA CACCATCGAA GAATTAAGCT ACAAAGCGTA A
 
Protein sequence
MTTIVSVRRN GHVVIAGDGQ ATLGNTVMKG NVKKVRRLYN DKVIAGFAGG TADAFTLFEL 
FERKLEMHQG HLVKAAVELA KDWRTDRMLR KLEALLAVAD ETASLIITGN GDVVQPENDL
IAIGSGGPYA QAAARALLEN TELSAREIAE KALDIAGDIC IYTNHFHTIE ELSYKA