| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3989 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 4309825 |
|---|
| End bp | 4311150 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | ACX41589 |
|---|
| Protein GI | 260451167 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.716922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACG ATAATATCGA TATTCTGGTG GTGGATGATG ACATTAGCCA CTGCACTATT
TTGCAGGCTT TACTGCGCGG CTGGGGCTAT AACGTCGCGC TGGCGAACAG CGGGCGACAG
GCGTTGGAGC AGGTGCGGGA ACAGGTTTTT GATCTTGTGC TTTGCGATGT GCGAATGGCG
GAGATGGACG GCATCGCCAC GCTGAAAGAG ATCAAAGCGT TAAACCCGGC AATTCCGGTG
CTGATTATGA CTGCGTACTC CAGCGTCGAG ACGGCGGTAG AGGCACTGAA AACTGGGGCG
CTGGATTATC TCATCAAGCC GCTGGATTTC GATAACCTAC AGGCGACGCT GGAAAAAGCG
CTCGCGCATA CGCACAGTAT TGATGCTGAA ACACCTGCGG TGACTGCCAG CCAGTTCGGT
ATGGTCGGTA AAAGCCCGGC GATGCAACAC CTGCTCAGTG AAATCGCCCT CGTCGCGCCA
TCGGAAGCCA CGGTACTGAT CCACGGCGAT TCCGGCACCG GTAAAGAGCT GGTCGCCAGG
GCGATTCACG CCAGTAGCGC ACGTAGCGAA AAACCGCTGG TAACGCTCAA CTGTGCGGCA
CTCAACGAAT CCTTGCTGGA ATCTGAATTG TTCGGTCACG AAAAAGGGGC GTTTACTGGA
GCCGATAAAC GCCGGGAAGG GCGCTTTGTT GAGGCGGACG GCGGCACGCT GTTTCTCGAT
GAAATTGGCG ATATCTCGCC GATGATGCAG GTGCGTCTGC TGCGTGCGAT TCAGGAGCGC
GAAGTTCAGC GTGTCGGTAG CAACCAGATT ATCTCGGTTG ATGTCCGGCT GATTGCGGCG
ACCCATCGCG ATCTTGCCGC AGAGGTGAAT GCCGGGCGTT TTCGCCAGGA TCTCTACTAT
CGCCTGAATG TGGTGGCGAT TGAAGTACCA TCGCTGCGGC AACGGCGGGA AGATATCCCT
CTGCTGGCTG GCCATTTTCT GCAGCGCTTT GCCGAGCGTA ATCGCAAGGC GGTAAAAGGT
TTTACGCCCC AGGCGATGGA TCTGTTGATT CATTACGACT GGCCGGGAAA TATTCGTGAG
CTGGAAAACG CGGTGGAACG GGCAGTGGTG CTGCTGACCG GGGAATATAT TTCCGAACGC
GAGCTGCCGC TGGCGATTGC CAGTACGCCG ATCCCGCTGG GACAAAGTCA GGATATTCAG
CCGTTGGTGG AAGTGGAAAA AGAGGTGATT CTGGCGGCGC TGGAGAAAAC GGGCGGCAAC
AAAACCGAAG CCGCCCGTCA GTTAGGGATC ACGCGCAAAA CGCTATTGGC AAAACTGTCG
CGTTAG
|
|---|
| Protein sequence | MTHDNIDILV VDDDISHCTI LQALLRGWGY NVALANSGRQ ALEQVREQVF DLVLCDVRMA
EMDGIATLKE IKALNPAIPV LIMTAYSSVE TAVEALKTGA LDYLIKPLDF DNLQATLEKA
LAHTHSIDAE TPAVTASQFG MVGKSPAMQH LLSEIALVAP SEATVLIHGD SGTGKELVAR
AIHASSARSE KPLVTLNCAA LNESLLESEL FGHEKGAFTG ADKRREGRFV EADGGTLFLD
EIGDISPMMQ VRLLRAIQER EVQRVGSNQI ISVDVRLIAA THRDLAAEVN AGRFRQDLYY
RLNVVAIEVP SLRQRREDIP LLAGHFLQRF AERNRKAVKG FTPQAMDLLI HYDWPGNIRE
LENAVERAVV LLTGEYISER ELPLAIASTP IPLGQSQDIQ PLVEVEKEVI LAALEKTGGN
KTEAARQLGI TRKTLLAKLS R
|
|---|
| |