Gene EcDH1_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3988 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4308539 
End bp4309828 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content58% 
IMG OID 
Productphosphoribosylamine/glycine ligase 
Protein accessionACX41588 
Protein GI260451166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0361396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAT TAGTGATTGG TAACGGCGGG CGCGAGCACG CGCTGGCCTG GAAAGCGGCC 
CAGTCGCCGC TGGTTGAGAC TGTTTTTGTT GCTCCGGGTA ATGCAGGCAC TGCACTGGAA
CCCGCGCTGC AAAACGTTGC TATTGGCGTG ACCGATATCC CGGCGCTGTT GGATTTCGCA
CAAAACGAAA AGATTGATCT GACCATCGTC GGCCCGGAAG CGCCGCTGGT GAAAGGCGTG
GTCGATACCT TCCGCGCCGC CGGGCTGAAA ATCTTCGGCC CAACCGCAGG TGCGGCCCAA
CTGGAAGGCT CAAAAGCGTT TACCAAAGAT TTCCTGGCCC GCCATAAGAT CCCTACGGCG
GAATACCAGA ACTTCACCGA GGTAGAACCT GCGCTGGCGT ATCTGCGTGA GAAAGGCGCG
CCAATCGTCA TTAAAGCGGA CGGTCTGGCT GCCGGGAAAG GCGTTATCGT GGCGATGACG
CTGGAAGAAG CGGAAGCGGC TGTTCACGAT ATGCTGGCGG GCAACGCTTT TGGCGACGCG
GGTCATCGCA TCGTTATCGA AGAGTTCCTC GATGGCGAAG AAGCGAGCTT TATCGTGATG
GTGGACGGCG AGCATGTGCT GCCGATGGCT ACCAGCCAGG ATCACAAACG CGTAGGCGAT
AAAGATACCG GACCAAACAC CGGCGGGATG GGCGCTTACT CCCCCGCGCC GGTAGTAACC
GATGACGTTC ATCAGCGCAC CATGGAACGT ATTATCTGGC CAACCGTGAA AGGCATGGCG
GCGGAAGGCA ACACCTACAC CGGTTTTCTC TACGCGGGCC TGATGATCGA CAAACAGGGC
AATCCGAAGG TTATTGAATT TAACTGCCGC TTTGGCGATC CGGAAACCCA GCCGATTATG
CTGCGCATGA AGTCCGATCT GGTTGAGCTC TGCCTGGCGG CCTGTGAAAG CAAACTGGAC
GAGAAAACGT CCGAGTGGGA TGAACGCGCT TCTCTCGGCG TGGTGATGGC TGCGGGTGGA
TATCCGGGTG ATTACCGCAC CGGTGACGTG ATCCACGGCC TGCCGCTGGA AGAAGTGGCA
GGCGGCAAAG TGTTCCACGC GGGCACAAAA CTGGCGGATG ACGAGCAGGT AGTGACCAAC
GGCGGGCGCG TACTGTGCGT CACCGCGCTG GGTCATACCG TGGCAGAAGC GCAGAAACGC
GCCTATGCCT TAATGACCGA TATCCACTGG GACGACTGCT TCTGCCGGAA AGATATCGGC
TGGCGCGCTA TCGAACGCGA GCAGAACTAA
 
Protein sequence
MKVLVIGNGG REHALAWKAA QSPLVETVFV APGNAGTALE PALQNVAIGV TDIPALLDFA 
QNEKIDLTIV GPEAPLVKGV VDTFRAAGLK IFGPTAGAAQ LEGSKAFTKD FLARHKIPTA
EYQNFTEVEP ALAYLREKGA PIVIKADGLA AGKGVIVAMT LEEAEAAVHD MLAGNAFGDA
GHRIVIEEFL DGEEASFIVM VDGEHVLPMA TSQDHKRVGD KDTGPNTGGM GAYSPAPVVT
DDVHQRTMER IIWPTVKGMA AEGNTYTGFL YAGLMIDKQG NPKVIEFNCR FGDPETQPIM
LRMKSDLVEL CLAACESKLD EKTSEWDERA SLGVVMAAGG YPGDYRTGDV IHGLPLEEVA
GGKVFHAGTK LADDEQVVTN GGRVLCVTAL GHTVAEAQKR AYALMTDIHW DDCFCRKDIG
WRAIEREQN