Gene EcDH1_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3972 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4279063 
End bp4280712 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content51% 
IMG OID 
ProductGlucose-6-phosphate isomerase 
Protein accessionACX41572 
Protein GI260451150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA TCAATCCAAC GCAGACCGCT GCCTGGCAGG CACTACAGAA ACACTTCGAT 
GAAATGAAAG ACGTTACGAT CGCCGATCTT TTTGCTAAAG ACGGCGATCG TTTTTCTAAG
TTCTCCGCAA CCTTCGACGA TCAGATGCTG GTGGATTACT CCAAAAACCG CATCACTGAA
GAGACGCTGG CGAAATTACA GGATCTGGCG AAAGAGTGCG ATCTGGCGGG CGCGATTAAG
TCGATGTTCT CTGGCGAGAA GATCAACCGC ACTGAAAACC GCGCCGTGCT GCACGTAGCG
CTGCGTAACC GTAGCAATAC CCCGATTTTG GTTGATGGCA AAGACGTAAT GCCGGAAGTC
AACGCGGTGC TGGAGAAGAT GAAAACCTTC TCAGAAGCGA TTATTTCCGG TGAGTGGAAA
GGTTATACCG GCAAAGCAAT CACTGACGTA GTGAACATCG GGATCGGCGG TTCTGACCTC
GGCCCATACA TGGTGACCGA AGCTCTGCGT CCGTACAAAA ACCACCTGAA CATGCACTTT
GTTTCTAACG TCGATGGGAC TCACATCGCG GAAGTGCTGA AAAAAGTAAA CCCGGAAACC
ACGCTGTTCT TGGTAGCATC TAAAACCTTC ACCACTCAGG AAACTATGAC CAACGCCCAT
AGCGCGCGTG ACTGGTTCCT GAAAGCGGCA GGTGATGAAA AACACGTTGC AAAACACTTT
GTGGCGCTTT CCACCAATGC CAAAGCCGTT GGCGAGTTTG GTATTGATAC TGCCAACATG
TTCGAGTTCT GGGACTGGGT TGGCGGCCGT TACTCTTTGT GGTCAGCGAT TGGCCTGTCG
ATTGTTCTCT CCATCGGCTT TGATAACTTC GTTGAACTGC TTTCCGGCGC ACACGCGATG
GACAAGCATT TCTCCACCAC GCCTGCCGAG AAAAACCTGC CTGTACTGCT GGCGCTGATT
GGCATCTGGT ACAACAATTT CTTTGGTGCG GAAACTGAAG CGATTCTGCC GTATGACCAG
TATATGCACC GTTTCGCGGC GTACTTCCAG CAGGGCAATA TGGAGTCCAA CGGTAAGTAT
GTTGACCGTA ACGGTAACGT TGTGGATTAC CAGACTGGCC CGATTATCTG GGGTGAACCA
GGCACTAACG GTCAGCACGC GTTCTACCAG CTGATCCACC AGGGAACCAA AATGGTACCG
TGCGATTTCA TCGCTCCGGC TATCACCCAT AACCCGCTCT CTGATCATCA CCAGAAACTG
CTGTCTAACT TCTTCGCCCA GACCGAAGCG CTGGCGTTTG GTAAATCCCG CGAAGTGGTT
GAGCAGGAAT ATCGTGATCA GGGTAAAGAT CCGGCAACGC TTGACTACGT GGTGCCGTTC
AAAGTATTCG AAGGTAACCG CCCGACCAAC TCCATCCTGC TGCGTGAAAT CACTCCGTTC
AGCCTGGGTG CGTTGATTGC GCTGTATGAG CACAAAATCT TTACTCAGGG CGTGATCCTG
AACATCTTCA CCTTCGACCA GTGGGGCGTG GAACTGGGTA AACAGCTGGC GAACCGTATT
CTGCCAGAGC TGAAAGATGA TAAAGAAATC AGCAGCCACG ATAGCTCGAC CAATGGTCTG
ATTAACCGCT ATAAAGCGTG GCGCGGTTAA
 
Protein sequence
MKNINPTQTA AWQALQKHFD EMKDVTIADL FAKDGDRFSK FSATFDDQML VDYSKNRITE 
ETLAKLQDLA KECDLAGAIK SMFSGEKINR TENRAVLHVA LRNRSNTPIL VDGKDVMPEV
NAVLEKMKTF SEAIISGEWK GYTGKAITDV VNIGIGGSDL GPYMVTEALR PYKNHLNMHF
VSNVDGTHIA EVLKKVNPET TLFLVASKTF TTQETMTNAH SARDWFLKAA GDEKHVAKHF
VALSTNAKAV GEFGIDTANM FEFWDWVGGR YSLWSAIGLS IVLSIGFDNF VELLSGAHAM
DKHFSTTPAE KNLPVLLALI GIWYNNFFGA ETEAILPYDQ YMHRFAAYFQ QGNMESNGKY
VDRNGNVVDY QTGPIIWGEP GTNGQHAFYQ LIHQGTKMVP CDFIAPAITH NPLSDHHQKL
LSNFFAQTEA LAFGKSREVV EQEYRDQGKD PATLDYVVPF KVFEGNRPTN SILLREITPF
SLGALIALYE HKIFTQGVIL NIFTFDQWGV ELGKQLANRI LPELKDDKEI SSHDSSTNGL
INRYKAWRG