Gene EcDH1_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3854 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4147808 
End bp4149109 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content53% 
IMG OID 
Productanaerobic c4-dicarboxylate antiporter, Dcu family 
Protein accessionACX41456 
Protein GI260451034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGTTG TAGAACTCAT CATAGTTTTG CTGGCGATCT TCTTGGGCGC CAGATTGGGG 
GGAATAGGTA TTGGTTTTGC AGGCGGATTG GGGGTGCTGG TTCTTACCGC TATTGGCGTT
AAACCCGGTA ACATCCCGTT CGATGTCATC TCCATTATCA TGGCGGTTAT CGCCGCTATT
TCTGCCATGC AGGTTGCTGG CGGTCTGGAC TATCTGGTTC ATCAGACAGA AAAGCTGCTG
CGCCGTAACC CGAAATACAT CACGATCCTC GCACCGATCG TGACCTATTT CCTGACTATC
TTTGCTGGTA CTGGCAACAT CTCTCTGGCG ACACTGCCAG TTATCGCTGA AGTTGCGAAG
GAACAAGGCG TTAAACCTTG CCGTCCGCTG TCTACTGCAG TGGTATCCGC GCAGATTGCG
ATCACCGCAT CGCCAATCTC AGCGGCAGTG GTTTACATGT CTTCCGTGAT GGAAGGTCAT
GGCATCAGCT ACCTCCATCT GCTCTCCGTG GTCATCCCGT CCACCCTGCT GGCGGTTCTG
GTGATGTCCT TCCTGGTCAC TATGCTGTTC AACTCCAAAC TCTCTGACGA TCCGATTTAT
CGCAAGCGTC TGGAAGAGGG CCTGGTTGAA CTGCGCGGTG AAAAGCAGAT TGAAATCAAA
TCCGGTGCAA AAACGTCCGT CTGGCTGTTC CTGCTGGGCG TAGTTGGCGT GGTTATCTAT
GCAATCATCA ACAGCCCAAG CATGGGTCTG GTTGAAAAAC CGCTGATGAA CACCACCAAC
GCAATCCTGA TCATCATGCT CAGCGTTGCA ACTCTGACCA CCGTTATCTG TAAAGTCGAT
ACCGACAACA TCCTCAACTC CAGCACCTTC AAAGCAGGTA TGAGCGCCTG TATTTGTATC
CTGGGTGTTG CGTGGCTGGG CGATACTTTC GTTTCCAACA ACATCGACTG GATCAAAGAT
ACCGCTGGTG AAGTGATTCA GGGTCATCCG TGGCTGCTGG CCGTCATCTT CTTCTTTGCT
TCTGCTCTGC TGTACTCTCA GGCTGCAACC GCAAAAGCAC TGATGCCGAT GGCTCTGGCA
CTGAACGTTT CACCGCTGAC CGCTGTTGCT TCTTTCGCTG CGGTGTCTGG TCTGTTCATT
CTGCCGACCT ACCCGACGCT GGTTGCTGCG GTACAGATGG ATGACACGGG TACTACCCGT
ATCGGTAAAT TCGTCTTCAA CCATCCGTTC TTCATCCCGG GTACTCTGGG TGTTGCCCTG
GCCGTTTGCT TCGGCTTCGT GCTGGGTAGC TTCATGCTGT AA
 
Protein sequence
MLVVELIIVL LAIFLGARLG GIGIGFAGGL GVLVLTAIGV KPGNIPFDVI SIIMAVIAAI 
SAMQVAGGLD YLVHQTEKLL RRNPKYITIL APIVTYFLTI FAGTGNISLA TLPVIAEVAK
EQGVKPCRPL STAVVSAQIA ITASPISAAV VYMSSVMEGH GISYLHLLSV VIPSTLLAVL
VMSFLVTMLF NSKLSDDPIY RKRLEEGLVE LRGEKQIEIK SGAKTSVWLF LLGVVGVVIY
AIINSPSMGL VEKPLMNTTN AILIIMLSVA TLTTVICKVD TDNILNSSTF KAGMSACICI
LGVAWLGDTF VSNNIDWIKD TAGEVIQGHP WLLAVIFFFA SALLYSQAAT AKALMPMALA
LNVSPLTAVA SFAAVSGLFI LPTYPTLVAA VQMDDTGTTR IGKFVFNHPF FIPGTLGVAL
AVCFGFVLGS FML