Gene EcDH1_3710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3710 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3999497 
End bp4000399 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content58% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionACX41318 
Protein GI260450896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.508283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCAT TTATCCGTTT TCTTTTTGCA GGCCTGCTGC TGGTGATCAG CCACGCCTTT 
GCCGCCACGG TTCAGGACGA ACACGGCACG TTTACACTCG AAAAAACGCC ACAACGGATT
GTGGTGCTGG AACTCTCGTT CGCCGATGCG CTGGCCGCCG TGGACGTCAT CCCGATCGGT
ATTGCCGACG ATAACGATGC AAAACGCATC CTGCCCGAAG TGCGTGCGCA CCTGAAACCG
TGGCAGTCCG TCGGAACGCG CGCGCAGCCG AGCCTGGAAG CCATTGCCGC TCTGAAACCA
GACCTGATCA TTGCCGACAG CAGTCGCCAT GCGGGGGTTT ACATCGCCTT GCAGCAAATC
GCGCCGGTAC TGCTGCTTAA GTCCCGCAAC GAAACCTACG CTGAAAATTT GCAATCTGCG
GCTATCATCG GCGAAATGGT GGGTAAAAAG CGAGAGATGC AGGCACGTCT GGAACAACAT
AAAGAGAGGA TGGCGCAGTG GGCCAGCCAG CTTCCCAAAG GGACACGCGT GGCCTTTGGC
ACATCACGCG AACAGCAATT CAACCTGCAT ACTCAGGAGA CCTGGACCGG CAGCGTGCTG
GCCTCTCTGG GGCTGAACGT TCCCGCTGCG ATGGCGGGTG CGTCCATGCC GTCCATCGGC
CTGGAGCAAC TGCTGGCGGT CAATCCTGCC TGGCTGCTGG TTGCCCACTA TCGCGAAGAG
AGCATTGTTA AACGCTGGCA ACAAGATCCG CTCTGGCAGA TGTTAACCGC CGCGCAGAAG
CAGCAGGTTG CTTCGGTCGA CAGTAACACC TGGGCGCGGA TGCGCGGTAT TTTTGCTGCA
GAGCGTATTG CCGCTGACAC GGTAAAAATC TTCCACCATC AGCCGCTTAC CGTTGTGAAA
TGA
 
Protein sequence
MLAFIRFLFA GLLLVISHAF AATVQDEHGT FTLEKTPQRI VVLELSFADA LAAVDVIPIG 
IADDNDAKRI LPEVRAHLKP WQSVGTRAQP SLEAIAALKP DLIIADSSRH AGVYIALQQI
APVLLLKSRN ETYAENLQSA AIIGEMVGKK REMQARLEQH KERMAQWASQ LPKGTRVAFG
TSREQQFNLH TQETWTGSVL ASLGLNVPAA MAGASMPSIG LEQLLAVNPA WLLVAHYREE
SIVKRWQQDP LWQMLTAAQK QQVASVDSNT WARMRGIFAA ERIAADTVKI FHHQPLTVVK