Gene EcDH1_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3625 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3903706 
End bp3904383 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionACX41238 
Protein GI260450816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.175354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGG ACTGGATTTT CTTTGATGCC GATGAAACGC TGTTTACCTT TGACTCATTC 
ACCGGCCTGC AGCGGATGTT TCTTGATTAC AGCGTCACCT TTACCGCTGA AGATTTTCAG
GACTATCAGG CCGTTAACAA GCCACTGTGG GTGGATTATC AAAACGGCGC GATCACTTCA
TTACAGCTTC AGCACGGGCG GTTTGAGAGC TGGGCCGAAC GGCTGAACGT CGAGCCAGGT
AAACTCAACG AAGCCTTTAT TAATGCGATG GCGGAAATCT GCACGCCGCT GCCGGGCGCG
GTTTCTCTGC TTAACGCCAT TCGTGGCAAC GCCAAAATCG GCATCATCAC CAACGGCTTT
AGTGCCTTGC AACAGGTGCG TCTGGAACGC ACGGGCCTGC GTGATTACTT CGATTTGCTG
GTGATTTCCG AAGAAGTTGG CGTTGCCAAA CCGAATAAGA AAATTTTCGA TTATGCGCTG
GAACAGGCGG GCAATCCTGA CCGTTCACGC GTGCTGATGG TTGGCGACAC TGCCGAGTCC
GATATTCTCG GTGGCATCAA CGCCGGGCTT GCGACCTGCT GGCTGAATGC ACACCATCGC
GAGCAACCAG AAGGCATCGC GCCCACCTGG ACCGTTTCTT CGTTGCACGA ACTGGAGCAG
CTCCTGTGTA AACACTGA
 
Protein sequence
MKWDWIFFDA DETLFTFDSF TGLQRMFLDY SVTFTAEDFQ DYQAVNKPLW VDYQNGAITS 
LQLQHGRFES WAERLNVEPG KLNEAFINAM AEICTPLPGA VSLLNAIRGN AKIGIITNGF
SALQQVRLER TGLRDYFDLL VISEEVGVAK PNKKIFDYAL EQAGNPDRSR VLMVGDTAES
DILGGINAGL ATCWLNAHHR EQPEGIAPTW TVSSLHELEQ LLCKH