Gene EcDH1_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3570 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3844150 
End bp3845100 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content55% 
IMG OID 
Producthydroxymethylbutenyl pyrophosphate reductase 
Protein accessionACX41184 
Protein GI260450762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCC TGTTGGCCAA CCCGCGTGGT TTTTGTGCCG GGGTAGACCG CGCTATCAGC 
ATTGTTGAAA ACGCGCTGGC CATTTACGGC GCACCGATAT ATGTCCGTCA CGAAGTGGTA
CATAACCGCT ATGTGGTCGA TAGCTTGCGT GAGCGTGGGG CTATCTTTAT TGAGCAGATT
AGCGAAGTAC CGGACGGCGC GATCCTGATT TTCTCCGCAC ACGGTGTTTC TCAGGCGGTA
CGTAACGAAG CAAAAAGTCG CGATTTGACG GTGTTTGATG CCACCTGTCC GCTGGTGACC
AAAGTGCATA TGGAAGTCGC CCGCGCCAGT CGCCGTGGCG AAGAATCTAT TCTCATCGGT
CACGCCGGGC ACCCGGAAGT GGAAGGGACA ATGGGCCAGT ACAGTAACCC GGAAGGGGGA
ATGTATCTGG TCGAATCGCC GGACGATGTG TGGAAACTGA CGGTCAAAAA CGAAGAGAAG
CTCTCCTTTA TGACCCAGAC CACGCTGTCG GTGGATGACA CGTCTGATGT GATCGACGCG
CTGCGTAAAC GCTTCCCGAA AATTGTCGGT CCGCGCAAAG ATGACATCTG CTACGCCACG
ACTAACCGTC AGGAAGCGGT ACGCGCCCTG GCAGAACAGG CGGAAGTTGT GTTGGTGGTC
GGTTCGAAAA ACTCCTCCAA CTCCAACCGT CTGGCGGAGC TGGCCCAGCG TATGGGCAAA
CGCGCGTTTT TGATTGACGA TGCGAAAGAC ATCCAGGAAG AGTGGGTGAA AGAGGTTAAA
TGCGTCGGCG TGACTGCGGG CGCATCGGCT CCGGATATTC TGGTGCAGAA TGTGGTGGCA
CGTTTGCAGC AGCTGGGCGG TGGTGAAGCC ATTCCGCTGG AAGGCCGTGA AGAAAACATT
GTTTTCGAAG TGCCGAAAGA GCTGCGTGTC GATATTCGTG AAGTCGATTA A
 
Protein sequence
MQILLANPRG FCAGVDRAIS IVENALAIYG APIYVRHEVV HNRYVVDSLR ERGAIFIEQI 
SEVPDGAILI FSAHGVSQAV RNEAKSRDLT VFDATCPLVT KVHMEVARAS RRGEESILIG
HAGHPEVEGT MGQYSNPEGG MYLVESPDDV WKLTVKNEEK LSFMTQTTLS VDDTSDVIDA
LRKRFPKIVG PRKDDICYAT TNRQEAVRAL AEQAEVVLVV GSKNSSNSNR LAELAQRMGK
RAFLIDDAKD IQEEWVKEVK CVGVTAGASA PDILVQNVVA RLQQLGGGEA IPLEGREENI
VFEVPKELRV DIREVD