| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3567 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3840578 |
|---|
| End bp | 3841726 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | carbamoyl-phosphate synthase, small subunit |
|---|
| Protein accession | ACX41181 |
|---|
| Protein GI | 260450759 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTAAGT CAGCGCTATT GGTTCTGGAA GACGGAACCC AGTTTCACGG TCGGGCCATA
GGGGCAACAG GTTCGGCGGT TGGGGAAGTC GTTTTCAATA CTTCAATGAC CGGTTATCAA
GAAATCCTCA CTGATCCTTC CTATTCTCGT CAAATCGTTA CTCTTACTTA TCCCCATATT
GGCAATGTCG GCACCAATGA CGCCGATGAA GAATCTTCTC AGGTACATGC ACAAGGTCTG
GTGATTCGCG ACCTGCCGCT GATTGCCAGC AACTTCCGTA ATACCGAAGA CCTCTCTTCT
TACCTGAAAC GCCATAACAT CGTGGCGATT GCCGATATCG ATACCCGTAA GCTGACGCGT
TTACTGCGCG AGAAAGGCGC ACAGAATGGC TGCATTATCG CGGGCGATAA CCCGGATGCG
GCGCTGGCGT TAGAAAAAGC CCGCGCGTTC CCAGGTCTGA ATGGCATGGA TCTGGCAAAA
GAAGTGACCA CCGCAGAAGC CTATAGCTGG ACACAAGGGA GCTGGACGTT GACCGGTGGC
CTGCCAGAAG CGAAAAAAGA AGACGAGCTG CCGTTCCACG TCGTGGCTTA TGATTTTGGT
GCCAAGCGCA ACATCCTGCG GATGCTGGTG GATAGAGGCT GTCGCCTGAC CATCGTTCCG
GCGCAAACTT CTGCGGAAGA TGTGCTGAAA ATGAATCCAG ACGGCATCTT CCTCTCCAAC
GGTCCTGGCG ACCCGGCCCC GTGCGATTAC GCCATTACCG CCATCCAGAA ATTCCTCGAA
ACCGATATTC CGGTATTCGG CATCTGTCTC GGTCATCAGC TGCTGGCGCT GGCGAGCGGT
GCGAAGACTG TCAAAATGAA ATTTGGTCAC CACGGCGGCA ACCATCCGGT TAAAGATGTG
GAGAAAAACG TGGTAATGAT CACCGCCCAG AACCACGGTT TTGCGGTGGA CGAAGCAACA
TTACCTGCAA ACCTGCGTGT CACGCATAAA TCCCTGTTCG ACGGTACGTT ACAGGGCATT
CATCGCACCG ATAAACCGGC ATTCAGCTTC CAGGGGCACC CTGAAGCCAG CCCTGGTCCA
CACGACGCCG CGCCGTTGTT CGACCACTTT ATCGAGTTAA TTGAGCAGTA CCGTAAAACC
GCTAAGTAA
|
|---|
| Protein sequence | MIKSALLVLE DGTQFHGRAI GATGSAVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI
GNVGTNDADE ESSQVHAQGL VIRDLPLIAS NFRNTEDLSS YLKRHNIVAI ADIDTRKLTR
LLREKGAQNG CIIAGDNPDA ALALEKARAF PGLNGMDLAK EVTTAEAYSW TQGSWTLTGG
LPEAKKEDEL PFHVVAYDFG AKRNILRMLV DRGCRLTIVP AQTSAEDVLK MNPDGIFLSN
GPGDPAPCDY AITAIQKFLE TDIPVFGICL GHQLLALASG AKTVKMKFGH HGGNHPVKDV
EKNVVMITAQ NHGFAVDEAT LPANLRVTHK SLFDGTLQGI HRTDKPAFSF QGHPEASPGP
HDAAPLFDHF IELIEQYRKT AK
|
|---|
| |