Gene EcDH1_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3561 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3832262 
End bp3833479 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content53% 
IMG OID 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionACX41175 
Protein GI260450753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCATC TACCCATGCC GAAATTCGGG CCGTTGGCCG GATTGCGCGT TGTCTTCTCC 
GGTATCGAAA TCGCCGGACC GTTTGCCGGG CAAATGTTCG CAGAATGGGG CGCGGAAGTT
ATCTGGATCG AGAACGTCGC CTGGGCCGAC ACCATTCGCG TTCAACCGAA CTACCCGCAA
CTCTCCCGCC GCAATTTGCA CGCGCTGTCG TTAAATATTT TCAAAGATGA AGGCCGCGAA
GCGTTTCTGA AATTAATGGA AACCACCGAT ATCTTCATCG AAGCCAGTAA AGGTCCGGCC
TTTGCCCGTC GTGGCATTAC CGATGAAGTA CTGTGGCAGC ACAACCCGAA ACTGGTTATC
GCTCACCTGT CCGGTTTTGG TCAGTACGGC ACCGAGGAGT ACACCAATCT TCCGGCCTAT
AACACTATCG CCCAGGCCTT TAGTGGTTAC CTGATTCAGA ACGGTGATGT TGACCAGCCA
ATGCCTGCCT TCCCGTATAC CGCCGATTAC TTTTCTGGCC TGACCGCCAC CACGGCGGCG
CTGGCAGCAC TGCATAAAGT GCGTGAAACC GGTAAAGGCG AAAGTATCGA CATCGCCATG
TATGAAGTGA TGCTGCGTAT GGGCCAGTAC TTCATGATGG ATTACTTCAA CGGCGGCGAA
ATGTGCCCGC GCATGAGCAA AGGTAAAGAT CCCTACTACG CCGGTTGCGG TCTGTATAAA
TGTGCCGACG GCTACATCGT GATGGAACTG GTGGGCATTA CCCAAATTGA AGAGTGCTTT
AAAGATATTG GCCTCGCACA TCTGCTTGGC ACGCCAGAAA TCCCGGAAGG CACTCAGCTT
ATCCACCGTA TCGAATGCCC TTACGGCCCA CTGGTTGAAG AGAAACTCGA TGCCTGGCTG
GCGACACATA CCATCGCGGA AGTAAAAGAA CGCTTTGCTG AACTGAATAT CGCCTGCGCC
AAAGTGCTGA CCGTACCGGA ACTGGAAAGC AATCCACAGT ATGTGGCTCG CGAATCAATC
ACTCAGTGGC AAACGATGGA TGGTCGCACC TGCAAAGGGC CGAACATCAT GCCGAAATTC
AAAAATAACC CCGGACAAAT CTGGCGCGGA ATGCCCTCAC ATGGCATGGA CACGGCTGCC
ATTTTGAAAA ATATCGGCTA CAGCGAAAAC GACATTCAGG AGTTGGTCAG CAAAGGTCTG
GCCAAAGTTG AGGACTAA
 
Protein sequence
MDHLPMPKFG PLAGLRVVFS GIEIAGPFAG QMFAEWGAEV IWIENVAWAD TIRVQPNYPQ 
LSRRNLHALS LNIFKDEGRE AFLKLMETTD IFIEASKGPA FARRGITDEV LWQHNPKLVI
AHLSGFGQYG TEEYTNLPAY NTIAQAFSGY LIQNGDVDQP MPAFPYTADY FSGLTATTAA
LAALHKVRET GKGESIDIAM YEVMLRMGQY FMMDYFNGGE MCPRMSKGKD PYYAGCGLYK
CADGYIVMEL VGITQIEECF KDIGLAHLLG TPEIPEGTQL IHRIECPYGP LVEEKLDAWL
ATHTIAEVKE RFAELNIACA KVLTVPELES NPQYVARESI TQWQTMDGRT CKGPNIMPKF
KNNPGQIWRG MPSHGMDTAA ILKNIGYSEN DIQELVSKGL AKVED