Gene EcDH1_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3550 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3820155 
End bp3820997 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content56% 
IMG OID 
Productbis(5'nucleosyl)-tetraphosphatase, ApaH 
Protein accessionACX41164 
Protein GI260450742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAT ACCTTATTGG CGACGTTCAT GGTTGTTACG ATGAACTGAT CGCATTGCTG 
CATAAAGTAG AATTTACCCC TGGGAAAGAT ACCCTCTGGC TGACGGGCGA TCTGGTCGCG
CGCGGGCCGG GTTCGCTGGA TGTTCTGCGC TATGTGAAAT CCTTAGGCGA CAGCGTACGT
CTGGTGCTGG GCAATCACGA TCTGCATCTG CTGGCGGTAT TTGCCGGGAT CAGCCGCAAT
AAACCGAAAG ATCGCCTGAC ACCGCTGCTG GAAGCGCCGG ATGCCGACGA GCTGCTTAAC
TGGCTGCGGC GCCAGCCTCT GCTGCAAATC GACGAAGAGA AAAAGCTGGT GATGGCCCAC
GCAGGGATCA CGCCGCAGTG GGATCTGCAG ACCGCCAAAG AGTGCGCACG CGATGTAGAA
GCGGTGCTAT CGAGTGACTC CTATCCCTTC TTTCTTGATG CCATGTACGG CGATATGCCA
AATAACTGGT CACCGGAATT GCGGGGGCTG GGAAGACTGC GTTTTATCAC CAACGCTTTT
ACCCGTATGC GTTTTTGCTT CCCGAACGGT CAACTGGATA TGTACAGCAA AGAATCGCCG
GAAGAGGCCC CTGCCCCACT GAAACCGTGG TTTGCGATTC CTGGCCCTGT CGCTGAAGAA
TACAGCATCG CCTTTGGTCA CTGGGCATCG CTGGAGGGCA AAGGTACGCC GGAAGGTATA
TACGCGCTGG ATACCGGCTG CTGCTGGGGT GGTACATTAA CCTGCCTGCG CTGGGAAGAT
AAACAGTATT TTGTCCAGCC GTCGAACCGG CATAAGGATT TGGGCGAAGC GGCGGCGTCT
TAA
 
Protein sequence
MATYLIGDVH GCYDELIALL HKVEFTPGKD TLWLTGDLVA RGPGSLDVLR YVKSLGDSVR 
LVLGNHDLHL LAVFAGISRN KPKDRLTPLL EAPDADELLN WLRRQPLLQI DEEKKLVMAH
AGITPQWDLQ TAKECARDVE AVLSSDSYPF FLDAMYGDMP NNWSPELRGL GRLRFITNAF
TRMRFCFPNG QLDMYSKESP EEAPAPLKPW FAIPGPVAEE YSIAFGHWAS LEGKGTPEGI
YALDTGCCWG GTLTCLRWED KQYFVQPSNR HKDLGEAAAS