Gene EcDH1_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3534 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3799262 
End bp3800026 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content54% 
IMG OID 
ProductSNARE associated Golgi protein-like protein 
Protein accessionACX41148 
Protein GI260450726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCAT TGCTGGAACA CTTTATTACC CAATCCACCG TGTATTCATT GATGGCGGTG 
GTGTTGGTGG CCTTTCTGGA GTCGCTGGCG CTGGTCGGTT TGATTCTACC CGGTACGGTG
CTGATGGCGG GGCTGGGAGC GCTGATTGGC AGCGGCGAGT TAAGTTTCTG GCACGCCTGG
CTGGCAGGGA TTATTGGCTG CTTGATGGGC GACTGGATTT CTTTCTGGCT GGGTTGGCGT
TTTAAAAAGC CGTTGCATCG CTGGTCATTT CTGAAGAAAA ACAAAGCACT ACTTGATAAA
ACTGAACATG CGTTGCATCA ACACAGCATG TTCACCATTC TGGTCGGTCG TTTTGTTGGC
CCGACGCGTC CGCTGGTGCC AATGGTGGCG GGAATGCTGG ATCTGCCGGT GGCTAAATTT
ATTACGCCGA ATATTATCGG CTGCCTGCTG TGGCCGCCGT TTTACTTCCT GCCAGGGATT
CTGGCGGGCG CGGCGATCGA TATTCCTGCC GGAATGCAGA GCGGTGAGTT TAAATGGTTG
CTGCTGGCAA CAGCGGTGTT TTTGTGGGTT GGTGGCTGGC TGTGCTGGCG GTTATGGCGC
AGCGGTAAAG CGACTGACCG TTTGAGTCAT TATTTGTCCC GCGGTCGTTT GTTGTGGCTG
ACGCCGTTGA TTTCTGCCAT CGGCGTGGTG GCGCTGGTGG TGTTAATTCG CCACCCGTTG
ATGCCGGTGT ATATCGATAT TTTGCGTAAA GTGGTTGGGG TTTAG
 
Protein sequence
MQALLEHFIT QSTVYSLMAV VLVAFLESLA LVGLILPGTV LMAGLGALIG SGELSFWHAW 
LAGIIGCLMG DWISFWLGWR FKKPLHRWSF LKKNKALLDK TEHALHQHSM FTILVGRFVG
PTRPLVPMVA GMLDLPVAKF ITPNIIGCLL WPPFYFLPGI LAGAAIDIPA GMQSGEFKWL
LLATAVFLWV GGWLCWRLWR SGKATDRLSH YLSRGRLLWL TPLISAIGVV ALVVLIRHPL
MPVYIDILRK VVGV