Gene EcDH1_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3525 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3789419 
End bp3790510 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content55% 
IMG OID 
Product3-isopropylmalate dehydrogenase 
Protein accessionACX41140 
Protein GI260450718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGA ATTACCATAT TGCCGTATTG CCGGGGGACG GTATTGGTCC GGAAGTGATG 
ACCCAGGCGC TGAAAGTGCT GGATGCCGTG CGCAACCGCT TTGCGATGCG CATCACCACC
AGCCATTACG ATGTAGGCGG CGCAGCCATT GATAACCACG GGCAACCACT GCCGCCTGCG
ACGGTTGAAG GTTGTGAGCA AGCCGATGCC GTGCTGTTTG GCTCGGTAGG CGGCCCGAAG
TGGGAACATT TACCACCAGA CCAGCAACCA GAACGCGGCG CGCTGCTGCC TCTGCGTAAG
CACTTCAAAT TATTCAGCAA CCTGCGCCCG GCAAAACTGT ATCAGGGGCT GGAAGCATTC
TGTCCGCTGC GTGCAGACAT TGCCGCAAAC GGCTTCGACA TCCTGTGTGT GCGCGAACTG
ACCGGCGGCA TCTATTTCGG TCAGCCAAAA GGCCGCGAAG GTAGCGGACA ATATGAAAAA
GCCTTTGATA CCGAGGTGTA TCACCGTTTT GAGATCGAAC GTATCGCCCG CATCGCGTTT
GAATCTGCTC GCAAGCGTCG CCACAAAGTG ACGTCGATCG ATAAAGCCAA CGTGCTGCAA
TCCTCTATTT TATGGCGGGA GATCGTTAAC GAGATCGCCA CGGAATACCC GGATGTCGAA
CTGGCGCATA TGTACATCGA CAACGCCACC ATGCAGCTGA TTAAAGATCC ATCACAGTTT
GACGTTCTGC TGTGCTCCAA CCTGTTTGGC GACATTCTGT CTGACGAGTG CGCAATGATC
ACTGGCTCGA TGGGGATGTT GCCTTCCGCC AGCCTGAACG AGCAAGGTTT TGGACTGTAT
GAACCGGCGG GCGGCTCGGC ACCAGATATC GCAGGCAAAA ACATCGCCAA CCCGATTGCA
CAAATCCTTT CGCTGGCACT GCTGCTGCGT TACAGCCTGG ATGCCGATGA TGCGGCTTGC
GCCATTGAAC GCGCCATTAA CCGCGCATTA GAAGAAGGCA TTCGCACCGG GGATTTAGCC
CGTGGCGCTG CCGCCGTTAG TACCGATGAA ATGGGCGATA TCATTGCCCG CTATGTAGCA
GAAGGGGTGT AA
 
Protein sequence
MSKNYHIAVL PGDGIGPEVM TQALKVLDAV RNRFAMRITT SHYDVGGAAI DNHGQPLPPA 
TVEGCEQADA VLFGSVGGPK WEHLPPDQQP ERGALLPLRK HFKLFSNLRP AKLYQGLEAF
CPLRADIAAN GFDILCVREL TGGIYFGQPK GREGSGQYEK AFDTEVYHRF EIERIARIAF
ESARKRRHKV TSIDKANVLQ SSILWREIVN EIATEYPDVE LAHMYIDNAT MQLIKDPSQF
DVLLCSNLFG DILSDECAMI TGSMGMLPSA SLNEQGFGLY EPAGGSAPDI AGKNIANPIA
QILSLALLLR YSLDADDAAC AIERAINRAL EEGIRTGDLA RGAAAVSTDE MGDIIARYVA
EGV