| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3458 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3711265 |
|---|
| End bp | 3712191 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Glutamate--tRNA ligase |
|---|
| Protein accession | ACX41073 |
|---|
| Protein GI | 260450651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000000233336 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCGC CTTATTTTTT GTTCAAAGAG ATGACAGACA CACAGTATAT TGGCCGCTTC
GCCCCCTCTC CTTCCGGCGA GCTTCATTTT GGCTCTCTGA TCGCCGCGCT CGGCAGCTAT
TTGCAGGCTC GCGCCCGGCA AGGTCGCTGG CTGGTACGCA TAGAAGATAT CGACCCGCCT
CGTGAAGTTC CCGGTGCCGC AGAAACTATC CTGCGCCAGC TGGAACATTA CGGTCTGCAC
TGGGACGGCG ATGTTCTCTG GCAATCGCAA CGTCACGACG CCTATCGTGA AGCACTCGCC
TGGTTACATG AACAAGGACT AAGTTATTAC TGCACCTGTA CGCGTGCGCG TATTCAAAGC
ATTGGCGGTA TTTACGACGG TCATTGCCGG GTGTTGCATC ATGGACCAGA CAACGCCGCA
GTGCGTATCC GCCAGCAGCA TCCGGTCACG CAATTTACTG ACCAGCTGCG CGGCATTATT
CACGCCGACG AAAAACTGGC ACGGGAAGAT TTTATCATTC ATCGCCGTGA TGGGTTGTTC
GCCTACAACC TGGCTGTTGT GGTTGATGAT CATTTCCAGG GCGTTACAGA AATAGTGCGT
GGGGCTGATC TGATTGAACC AACAGTAAGG CAAATCTCGC TGTACCAGCT TTTTGGCTGG
AAAGTGCCAG ATTACATTCA TCTGCCGCTG GCGCTTAATC CACAAGGCGC TAAACTTTCC
AAGCAGAATC ATGCGCCTGC GTTGCCGAAA GGCGATCCAC GCCCGGTACT AATCGCGGCA
CTTCAATTTC TGGGGCAGCA GGCAGAAGCA CACTGGCAGG ATTTCAGCGT CGAGCAAATC
CTTCAGTCAG CCGTCAAAAA CTGGCGGCTT ACCGCCGTGC CCGAGTCGGC AATTGTAAAT
TCAACATTCT CAAATGCGTC ATGCTGA
|
|---|
| Protein sequence | MLPPYFLFKE MTDTQYIGRF APSPSGELHF GSLIAALGSY LQARARQGRW LVRIEDIDPP
REVPGAAETI LRQLEHYGLH WDGDVLWQSQ RHDAYREALA WLHEQGLSYY CTCTRARIQS
IGGIYDGHCR VLHHGPDNAA VRIRQQHPVT QFTDQLRGII HADEKLARED FIIHRRDGLF
AYNLAVVVDD HFQGVTEIVR GADLIEPTVR QISLYQLFGW KVPDYIHLPL ALNPQGAKLS
KQNHAPALPK GDPRPVLIAA LQFLGQQAEA HWQDFSVEQI LQSAVKNWRL TAVPESAIVN
STFSNASC
|
|---|
| |