| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3454 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | - |
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| Start bp | 3706843 |
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| End bp | 3709317 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | ACX41069 |
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| Protein GI | 260450647 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.629145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAAT GTGGCGCGAA GAATGTTAAC CCTCTGGAGC GTTTTGTGTC GTCGTTGCCC
GTTGCTGCCG TCTTACCTGA ATTACTTACC GCTCTCGATT GTGCGCCGCA GGTATTATTA
AGTGCGCCGA CCGGGGCCGG GAAATCAACC TGGCTGCCGC TGCAACTGCT GGCGCATCCC
GGCATTAACG GGAAAATTAT CCTGCTGGAG CCGCGTCGTC TGGCGGCGCG TAACGTCGCG
CAACGGCTGG CGGAGCTGCT TAACGAAAAG CCAGGCGATA CCGTTGGCTA CCGGATGCGT
GCGCAAAACT GCGTCGGGCC GAATACCCGC CTGGAAGTGG TTACCGAAGG CGTGCTGACG
CGCATGATCC AGCGTGACCC GGAACTGAGC GGTGTTGGAC TGGTGATCCT TGATGAATTT
CATGAGCGCA GCTTGCAGGC GGATTTGGCG TTGGCGCTGT TACTCGATGT GCAACAAGGT
CTGCGTGATG ACCTTAAACT GCTGATTATG TCGGCTACCC TGGACAACGA CCGCTTGCAG
CAAATGCTGC CAGAAGCGCC TGTCGTCATC TCAGAAGGGC GCTCGTTTCC GGTTGAACGC
CGTTATTTAC CGCTGCCCGC GCATCAGCGT TTTGACGATG CCGTTGCGGT AGCCACCGCT
GAAATGCTGC GTCAGGAAAG CGGATCATTA CTGTTATTTT TACCTGGCGT CGGAGAAATT
CAGCGTGTGC AGGAACAACT GGCTTCGCGC ATCGGCAGTG ATGTATTGCT CTGCCCGCTG
TATGGCGCGT TGTCGCTGAA CGATCAGCGA AAAGCGATCC TCCCGGCACC GCAAGGGATG
CGCAAAGTGG TGCTGGCGAC CAATATTGCT GAAACCAGTT TAACCATTGA AGGTATTCGT
CTGGTGGTGG ATTGTGCCCA GGAGCGTGTG GCGCGTTTTG ATCCGCGCAC GGGGCTTACG
CGACTGATTA CTCAACGCGT TAGCCAGGCA TCCATGACGC AGCGTGCCGG GCGCGCCGGG
CGTCTGGAGC CGGGTATCAG CCTGCATTTA ATCGCCAAAG AACAAGCAGA ACGCGCCGCG
GCGCAAAGTG AACCGGAGAT CTTACAAAGC GATCTTTCCG GTTTGCTGAT GGAATTACTG
CAATGGGGAT GCAGCGATCC GGCGCAGATG AGCTGGCTGG ATCAACCGCC AGTAGTGAAT
CTACTGGCCG CGAAACGTCT GTTACAAATG CTGGGGGCAC TGGAGGGTGA ACGGCTTAGT
GCGCAAGGGC AAAAAATGGC AGCGCTGGGT AACGATCCGC GTTTAGCGGC AATGCTGGTT
AGCGCGAAGA ACGACGACGA AGCTGCTACC GCGGCAAAAA TTGCCGCCAT TCTCGAAGAG
CCGCCACGGA TGGGCAATAG TGACCTGGGC GTGGCGTTTT CGCGCAATCA ACCAGCCTGG
CAGCAACGTA GTCAGCAACT GTTAAAACGC TTAAACGTAC GTGGCGGTGA GGCAGACAGT
TCGCTTATCG CGCCGCTACT TGCCGGGGCG TTTGCCGATC GCATTGCTCG TCGCCGTGGG
CAAGATGGAC GCTATCAACT GGCAAACGGC ATGGGAGCGA TGCTCGATGC CAACGACGCG
CTAAGCCGCC ACGAATGGTT GATCGCACCG TTATTATTGC AGGGCAGCGC CTCGCCGGAT
GCGCGGATTT TACTGGCGCT GCTGGTCGAT ATTGATGAGT TAGTACAACG CTGCCCGCAG
CTGGTACAGC AGTCTGACAC TGTGGAGTGG GATGACGCGC AAGGTACGCT GAAAGCCTGG
CGTCGGCTAC AAATCGGTCA GTTGACGGTG AAAGTGCAGC CGCTGGCGAA ACCGTCAGAA
GACGAGTTGC ATCAGGCGAT GCTTAATGGC ATCCGTGATA AAGGTTTAAG CGTGCTCAAC
TGGACGGCGG AAGCGGAACA GCTACGCTTG CGTTTGTTAT GCGCCGCAAA GTGGTTGCCG
GAATATGACT GGCCAGCGGT TGATGATGAA AGTTTATTGG CAGCGCTGGA AACGTGGCTG
CTGCCACATA TGACTGGCGT ACATTCACTA CGCGGCCTGA AATCACTCGA CATTTATCAG
GCACTACGCG GATTACTTGA TTGGGGAATG CAGCAACGTC TGGATAGTGA ATTGCCTGCG
CATTACACTG TGCCGACGGG AAGCCGGATC GCCATTCGTT ATCATGAAGA TAACCCGCCC
GCGCTGGCGG TGAGAATGCA AGAGATGTTT GGCGAGGCCA CCAATCCGAC GATCGCCCAG
GGGCGCGTGC CGCTGGTGCT GGAGTTGCTT TCACCTGCCC AAAGGCCATT ACAAATCACA
CGAGATTTGA GCGACTTCTG GAAAGGAGCG TACCGTGAGG TGCAAAAAGA GATGAAAGGG
CGTTATCCCA AACATGTCTG GCCGGACGAC CCGGCAAATA CTGCACCGAC GCGACGGACG
AAAAAGTATT CGTAA
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| Protein sequence | MLQCGAKNVN PLERFVSSLP VAAVLPELLT ALDCAPQVLL SAPTGAGKST WLPLQLLAHP
GINGKIILLE PRRLAARNVA QRLAELLNEK PGDTVGYRMR AQNCVGPNTR LEVVTEGVLT
RMIQRDPELS GVGLVILDEF HERSLQADLA LALLLDVQQG LRDDLKLLIM SATLDNDRLQ
QMLPEAPVVI SEGRSFPVER RYLPLPAHQR FDDAVAVATA EMLRQESGSL LLFLPGVGEI
QRVQEQLASR IGSDVLLCPL YGALSLNDQR KAILPAPQGM RKVVLATNIA ETSLTIEGIR
LVVDCAQERV ARFDPRTGLT RLITQRVSQA SMTQRAGRAG RLEPGISLHL IAKEQAERAA
AQSEPEILQS DLSGLLMELL QWGCSDPAQM SWLDQPPVVN LLAAKRLLQM LGALEGERLS
AQGQKMAALG NDPRLAAMLV SAKNDDEAAT AAKIAAILEE PPRMGNSDLG VAFSRNQPAW
QQRSQQLLKR LNVRGGEADS SLIAPLLAGA FADRIARRRG QDGRYQLANG MGAMLDANDA
LSRHEWLIAP LLLQGSASPD ARILLALLVD IDELVQRCPQ LVQQSDTVEW DDAQGTLKAW
RRLQIGQLTV KVQPLAKPSE DELHQAMLNG IRDKGLSVLN WTAEAEQLRL RLLCAAKWLP
EYDWPAVDDE SLLAALETWL LPHMTGVHSL RGLKSLDIYQ ALRGLLDWGM QQRLDSELPA
HYTVPTGSRI AIRYHEDNPP ALAVRMQEMF GEATNPTIAQ GRVPLVLELL SPAQRPLQIT
RDLSDFWKGA YREVQKEMKG RYPKHVWPDD PANTAPTRRT KKYS
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