Gene EcDH1_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3410 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3655399 
End bp3656109 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content52% 
IMG OID 
Productcopper resistance lipoprotein NlpE 
Protein accessionACX41026 
Protein GI260450604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAAA AAGCGATAGT GACAGCGATG GCTGTAATCA GCCTCTTTAC TCTGATGGGA 
TGTAATAATC GGGCCGAAGT CGATACGCTT TCTCCGGCGC AGGCTGCCGA ACTGAAACCG
ATGCCGCAAA GTTGGCGCGG CGTGCTGCCG TGTGCCGATT GCGAAGGAAT CGAAACCTCT
CTGTTCCTCG AAAAAGACGG AACATGGGTG ATGAATGAGC GTTATCTCGG TGCTCGTGAA
GAACCTTCCT CCTTCGCTTC CTACGGTACA TGGGCGCGAA CCGCTGACAA GCTGGTATTA
ACCGACAGCA AAGGTGAAAA GTCATATTAT CGGGCGAAAG GCGATGCGCT GGAGATGCTC
GATCGTGAAG GCAATCCGAT TGAATCGCAG TTCAACTATA CGCTGGAAGC GGCACAATCC
AGTTTACCTA TGACGCCGAT GACCCTGCGG GGCATGTATT TTTATATGGC TGATGCGGCG
ACCTTCACTG ATTGCGCGAC CGGAAAACGT TTCATGGTAG CGAATAACGC AGAGCTGGAG
CGTAGCTACC TGGCTGCGCG CGGTCACAGT GAAAAACCGG TGTTACTGTC AGTAGAAGGT
CACTTTACGC TTGAGGGTAA TCCGGATACC GGTGCGCCGA CTAAAGTATT GGCACCCGAT
ACGGCAGGGA AATTTTACCC CAACCAGGAT TGCAGTAGTT TGGGGCAGTA A
 
Protein sequence
MVKKAIVTAM AVISLFTLMG CNNRAEVDTL SPAQAAELKP MPQSWRGVLP CADCEGIETS 
LFLEKDGTWV MNERYLGARE EPSSFASYGT WARTADKLVL TDSKGEKSYY RAKGDALEML
DREGNPIESQ FNYTLEAAQS SLPMTPMTLR GMYFYMADAA TFTDCATGKR FMVANNAELE
RSYLAARGHS EKPVLLSVEG HFTLEGNPDT GAPTKVLAPD TAGKFYPNQD CSSLGQ