Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3405 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 3650450 |
End bp | 3651265 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | lipoprotein, YaeC family |
Protein accession | ACX41021 |
Protein GI | 260450599 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000434725 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGTTCA AATTCAAAAC CTTTGCGGCA GTGGGAGCCC TGATCGGATC ACTGGCACTG GTAGGCTGCG GTCAGGATGA AAAAGATCCA AACCACATTA AAGTCGGCGT GATTGTTGGT GCCGAACAGC AGGTTGCAGA AGTCGCGCAG AAAGTTGCGA AAGACAAATA TGGCCTGGAC GTTGAGCTGG TAACCTTCAA CGACTATGTT CTGCCAAACG AAGCATTGAG CAAAGGCGAT ATCGACGCCA ACGCCTTCCA GCATAAACCG TACCTTGATC AGCAACTGAA AGATCGTGGC TACAAACTGG TCGCAGTAGG CAACACTTTT GTTTATCCGA TTGCTGGTTA CTCCAAGAAA ATCAAATCAC TGGATGAACT GCAGGATGGT TCGCAGGTTG CCGTGCCAAA CGACCCAACT AACCTTGGTC GTTCACTGCT GCTGCTGCAA AAAGTGGGCT TGATCAAACT GAAAGATGGC GTTGGCCTGC TGCCGACCGT TCTTGATGTT GTTGAGAACC CCAAAAATCT GAAAATTGTT GAACTGGAAG CACCGCAACT GCCGCGTTCT CTGGACGACG CGCAAATCGC TCTGGCAGTT ATCAATACCA CCTATGCCAG CCAGATTGGC CTGACTCCGG CGAAAGACGG TATCTTTGTT GAAGATAAAG AGTCCCCGTA CGTAAACCTG ATCGTGACGC GTGAAGATAA CAAAGACGCC GAGAACGTGA AGAAATTCGT CCAGGCTTAT CAGTCTGACG AAGTTTACGA AGCAGCAAAC AAAGTGTTTA ACGGCGGAGC TGTTAAAGGC TGGTAA
|
Protein sequence | MAFKFKTFAA VGALIGSLAL VGCGQDEKDP NHIKVGVIVG AEQQVAEVAQ KVAKDKYGLD VELVTFNDYV LPNEALSKGD IDANAFQHKP YLDQQLKDRG YKLVAVGNTF VYPIAGYSKK IKSLDELQDG SQVAVPNDPT NLGRSLLLLQ KVGLIKLKDG VGLLPTVLDV VENPKNLKIV ELEAPQLPRS LDDAQIALAV INTTYASQIG LTPAKDGIFV EDKESPYVNL IVTREDNKDA ENVKKFVQAY QSDEVYEAAN KVFNGGAVKG W
|
| |