Gene EcDH1_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3366 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3612054 
End bp3613109 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content45% 
IMG OID 
Productporin Gram-negative type 
Protein accessionACX40986 
Protein GI260450564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA GCACTCTGGC ATTAGTGGTG ATGGGCATTG TGGCATCTGC ATCTGTACAG 
GCTGCAGAAA TATATAATAA AGACGGTAAT AAACTGGATG TCTATGGCAA AGTTAAAGCC
ATGCATTATA TGAGTGATAA CGCCAGTAAA GATGGCGACC AGAGTTATAT CCGTTTTGGT
TTCAAAGGCG AAACACAAAT TAACGATCAA CTGACTGGTT ATGGTCGTTG GGAAGCAGAG
TTTGCCGGTA ATAAAGCAGA GAGTGATACT GCACAGCAAA AAACGCGTCT CGCTTTTGCC
GGGTTGAAAT ATAAAGATTT GGGTTCTTTC GATTATGGTC GTAACCTGGG GGCGTTGTAT
GACGTGGAAG CCTGGACCGA TATGTTCCCG GAATTTGGTG GCGATTCCTC GGCGCAGACC
GACAACTTTA TGACCAAACG CGCCAGCGGT CTGGCGACGT ATCGGAACAC CGACTTCTTC
GGCGTTATCG ATGGCCTGAA CTTAACCCTG CAATATCAAG GGAAAAACGA AAACCGCGAC
GTTAAAAAGC AAAACGGCGA TGGCTTCGGC ACGTCATTGA CATATGACTT TGGCGGCAGC
GATTTCGCCA TTAGTGGGGC CTATACCAAC TCAGATCGCA CCAACGAGCA GAACCTGCAA
AGCCGTGGCA CAGGCAAGCG TGCAGAAGCA TGGGCAACAG GTCTGAAATA CGATGCCAAT
AATATTTATC TGGCAACTTT CTATTCTGAA ACACGCAAAA TGACGCCAAT AACTGGCGGC
TTTGCCAATA AGACACAGAA CTTTGAAGCG GTCGCTCAAT ACCAGTTTGA CTTTGGTCTG
CGTCCATCGC TGGGTTATGT CTTATCGAAA GGGAAAGATA TTGAAGGTAT CGGTGATGAA
GATCTGGTCA ATTATATCGA CGTCGGTGCT ACGTATTATT TCAACAAAAA TATGTCAGCG
TTTGTTGATT ATAAAATCAA CCAACTGGAT AGCGATAACA AATTGAATAT TAATAATGAT
GATATTGTCG CGGTTGGCAT GACGTATCAG TTTTAA
 
Protein sequence
MKKSTLALVV MGIVASASVQ AAEIYNKDGN KLDVYGKVKA MHYMSDNASK DGDQSYIRFG 
FKGETQINDQ LTGYGRWEAE FAGNKAESDT AQQKTRLAFA GLKYKDLGSF DYGRNLGALY
DVEAWTDMFP EFGGDSSAQT DNFMTKRASG LATYRNTDFF GVIDGLNLTL QYQGKNENRD
VKKQNGDGFG TSLTYDFGGS DFAISGAYTN SDRTNEQNLQ SRGTGKRAEA WATGLKYDAN
NIYLATFYSE TRKMTPITGG FANKTQNFEA VAQYQFDFGL RPSLGYVLSK GKDIEGIGDE
DLVNYIDVGA TYYFNKNMSA FVDYKINQLD SDNKLNINND DIVAVGMTYQ F