Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3366 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 3612054 |
End bp | 3613109 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | porin Gram-negative type |
Protein accession | ACX40986 |
Protein GI | 260450564 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA GCACTCTGGC ATTAGTGGTG ATGGGCATTG TGGCATCTGC ATCTGTACAG GCTGCAGAAA TATATAATAA AGACGGTAAT AAACTGGATG TCTATGGCAA AGTTAAAGCC ATGCATTATA TGAGTGATAA CGCCAGTAAA GATGGCGACC AGAGTTATAT CCGTTTTGGT TTCAAAGGCG AAACACAAAT TAACGATCAA CTGACTGGTT ATGGTCGTTG GGAAGCAGAG TTTGCCGGTA ATAAAGCAGA GAGTGATACT GCACAGCAAA AAACGCGTCT CGCTTTTGCC GGGTTGAAAT ATAAAGATTT GGGTTCTTTC GATTATGGTC GTAACCTGGG GGCGTTGTAT GACGTGGAAG CCTGGACCGA TATGTTCCCG GAATTTGGTG GCGATTCCTC GGCGCAGACC GACAACTTTA TGACCAAACG CGCCAGCGGT CTGGCGACGT ATCGGAACAC CGACTTCTTC GGCGTTATCG ATGGCCTGAA CTTAACCCTG CAATATCAAG GGAAAAACGA AAACCGCGAC GTTAAAAAGC AAAACGGCGA TGGCTTCGGC ACGTCATTGA CATATGACTT TGGCGGCAGC GATTTCGCCA TTAGTGGGGC CTATACCAAC TCAGATCGCA CCAACGAGCA GAACCTGCAA AGCCGTGGCA CAGGCAAGCG TGCAGAAGCA TGGGCAACAG GTCTGAAATA CGATGCCAAT AATATTTATC TGGCAACTTT CTATTCTGAA ACACGCAAAA TGACGCCAAT AACTGGCGGC TTTGCCAATA AGACACAGAA CTTTGAAGCG GTCGCTCAAT ACCAGTTTGA CTTTGGTCTG CGTCCATCGC TGGGTTATGT CTTATCGAAA GGGAAAGATA TTGAAGGTAT CGGTGATGAA GATCTGGTCA ATTATATCGA CGTCGGTGCT ACGTATTATT TCAACAAAAA TATGTCAGCG TTTGTTGATT ATAAAATCAA CCAACTGGAT AGCGATAACA AATTGAATAT TAATAATGAT GATATTGTCG CGGTTGGCAT GACGTATCAG TTTTAA
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Protein sequence | MKKSTLALVV MGIVASASVQ AAEIYNKDGN KLDVYGKVKA MHYMSDNASK DGDQSYIRFG FKGETQINDQ LTGYGRWEAE FAGNKAESDT AQQKTRLAFA GLKYKDLGSF DYGRNLGALY DVEAWTDMFP EFGGDSSAQT DNFMTKRASG LATYRNTDFF GVIDGLNLTL QYQGKNENRD VKKQNGDGFG TSLTYDFGGS DFAISGAYTN SDRTNEQNLQ SRGTGKRAEA WATGLKYDAN NIYLATFYSE TRKMTPITGG FANKTQNFEA VAQYQFDFGL RPSLGYVLSK GKDIEGIGDE DLVNYIDVGA TYYFNKNMSA FVDYKINQLD SDNKLNINND DIVAVGMTYQ F
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