Gene EcDH1_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3353 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3603194 
End bp3604057 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content57% 
IMG OID 
ProductGTP-binding protein HSR1-related protein 
Protein accessionACX40973 
Protein GI260450551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT CTGAAGGTTT GAAGTCGTTT CAGCAATCGC TTGCTGATCT GCCGCAATGG 
GTATCAGAGC GGCTTCTGCA GCAAATTAAC CAGTTAACTA ACTACGAGCC AGTGATCGGC
ATTATGGGTA AAACCGGTGT TGGGAAGAGC AGTCTGTGCA ATGCCCTGTT TGCCGGAGAT
ATATCACCGG TCAGCGATGT GGCGGCCTGT ACACGTGAGC CACTGCGCTT TCGCCTGCAA
GTCGGCGACC GCTATATAAC GCTGATGGAT CTGCCCGGCG TGGGCGAAAG TGGCGCTCGC
GATACCGAGT ATGCTGCGCT GTACCGCGAA CAGCTTCCTC GCCTCGACCT GGTACTGTGG
CTGATTAAGG CCGATGACCG GGCGCTGACG GTGGATGAAC ATTTTTATCA TCAGGTGATT
GGAGAGGTAT ACCGGCATAA GGTGCTGTTT GTTATCAGCC AGTCGGATAA GGCCGAACCT
ACCAGCGGTG GGGGACAGTT GTCCACGGCG CAGAAGCAGA ATATCAGCCG CAAAATCTGC
CTGCTGCATG AGCTGTTCCA GCCCGTCCAT CCGGTGTGTG CTGTGTCGGT CCGTCTACAA
TGGGGGCTTA AGGTGATGGC CGAGCGGATG ATTAAGTGCC TGCCACGTGA GGCCACCAGC
CCGGTGGTGT CGCAACTCCA TCCTTCCTTT CGCACGACGG TAGTCCGGGA ACAGGCTCGT
AGCGATTTTG GTGAAACCGT CGGGGCCGTA CTCGATAGCA TCAGTGCCTT TCCCCTGATA
CCCGCCCCGG TGCGGGCCGT CATTCAGGCC GTGCGCACCA CGGTGGTGTC AGTGGCCCGC
GCCGTCTGGG ATTTCTTCTT CTGA
 
Protein sequence
MNNSEGLKSF QQSLADLPQW VSERLLQQIN QLTNYEPVIG IMGKTGVGKS SLCNALFAGD 
ISPVSDVAAC TREPLRFRLQ VGDRYITLMD LPGVGESGAR DTEYAALYRE QLPRLDLVLW
LIKADDRALT VDEHFYHQVI GEVYRHKVLF VISQSDKAEP TSGGGQLSTA QKQNISRKIC
LLHELFQPVH PVCAVSVRLQ WGLKVMAERM IKCLPREATS PVVSQLHPSF RTTVVREQAR
SDFGETVGAV LDSISAFPLI PAPVRAVIQA VRTTVVSVAR AVWDFFF