| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3343 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3593352 |
|---|
| End bp | 3594398 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | ACX40963 |
|---|
| Protein GI | 260450541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGA AAAATTTCGT TGAACTGCGC AACGTCACTA AACGATTTGG CAGTAATACG
GTAATCGACA ATATCAACCT CACCATCCCG CAGGGGCAAA TGGTGACGCT GCTCGGCCCG
TCCGGCTGCG GCAAAACCAC TATTTTGCGC CTGGTTGCCG GGCTGGAAAA ACCGAGCGAA
GGGCAAATTT TCATTGATGG CGAAGACGTC ACCCATCGCT CTATTCAGCA GCGCGATATC
TGTATGGTGT TTCAGTCCTA TGCCCTGTTC CCGCATATGT CGCTGGGAGA GAATGTCGGT
TATGGCCTGA AAATGCTCGG CGTACCGCGC GCAGAGCTGA AAGCCCGCGT CAAAGAGGCG
TTGGCGATGG TGGATCTGGA AGGATTCGAA GACCGCTTTG TCGATCAGAT CTCCGGCGGG
CAGCAGCAGC GCGTGGCGCT GGCCCGCGCG CTGATCCTCA AGCCGAAAGT GCTGCTGTTT
GATGAGCCGT TGAGTAACCT CGACGCCAAC CTGCGTCGCA GCATGCGCGA CAAGATCCGC
GAGTTGCAAA AGCAGTTTGA TATCACCTCG CTGTACGTCA CCCACGATCA GAGCGAAGCC
TTTGCGGTTT CTGATACTGT GCTGGTGATG AACAAGGGAC ACATCATGCA GATCGGCTCA
CCGCAGGATC TTTACCGCCA GCCCGCCTCC CGCTTTATGG CGAGCTTTAT GGGCGATGCC
AACCTGTTCC CGGCAACCTT CAGCGACGGA TACGTTGATA TCTACGGCTA TCATCTGCCG
CGCCCGCTGC ACTTTGGTAC ACAGGGTGAA GGGATGGTCG GTGTGCGCCC GGAAGCGATC
ACGCTCAGCG ATCGCGGCGA AGAGAGCCAG CGCTGCGTGA TCCGCCATGT CGCCTATATG
GGGCCGCAGT ATGAAGTGAC GGTGGAATGG CACGGGCAGG AGATATTATT GCAGGTCAAC
GCTACGCGTC TGCAACCGGA CGTCGGCGAG CAGTATTATC TTGAAATCCA TCCGTACGGC
ATGTTTGTTC TGGCGGATGC GGCATAA
|
|---|
| Protein sequence | MTQKNFVELR NVTKRFGSNT VIDNINLTIP QGQMVTLLGP SGCGKTTILR LVAGLEKPSE
GQIFIDGEDV THRSIQQRDI CMVFQSYALF PHMSLGENVG YGLKMLGVPR AELKARVKEA
LAMVDLEGFE DRFVDQISGG QQQRVALARA LILKPKVLLF DEPLSNLDAN LRRSMRDKIR
ELQKQFDITS LYVTHDQSEA FAVSDTVLVM NKGHIMQIGS PQDLYRQPAS RFMASFMGDA
NLFPATFSDG YVDIYGYHLP RPLHFGTQGE GMVGVRPEAI TLSDRGEESQ RCVIRHVAYM
GPQYEVTVEW HGQEILLQVN ATRLQPDVGE QYYLEIHPYG MFVLADAA
|
|---|
| |