Gene EcDH1_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3242 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3484761 
End bp3485723 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content56% 
IMG OID 
Producttaurine ABC transporter, periplasmic binding protein 
Protein accessionACX40867 
Protein GI260450445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTT CATCGCGTAA CACACTTCTT GCCGCACTGG CATTCATCGC TTTTCAGGCA 
CAGGCGGTGA ACGTCACCGT GGCGTATCAA ACCTCAGCCG AACCGGCGAA AGTGGCTCAG
GCCGACAACA CCTTTGCTAA AGAAAGCGGA GCAACCGTGG ACTGGCGTAA GTTTGACAGC
GGAGCCAGCA TCGTGCGGGC GCTGGCTTCA GGCGACGTGC AAATCGGCAA CCTCGGTTCC
AGCCCGTTAG CGGTTGCAGC CAGCCAACAG GTGCCGATTG AAGTCTTCTT GCTGGCGTCA
AAACTGGGTA ACTCCGAAGC GCTGGTGGTA AAGAAAACTA TCAGCAAACC GGAAGATCTG
ATTGGCAAAC GCATCGCCGT ACCGTTTATC TCCACCACCC ACTACAGCCT GCTGGCGGCA
CTGAAACACT GGGGCATTAA ACCCGGGCAA GTGGAGATTG TGAACCTGCA GCCGCCCGCG
ATTATCGCTG CCTGGCAGCG GGGAGATATT GATGGTGCTT ATGTCTGGGC ACCGGCGGTT
AACGCCCTGG AAAAAGACGG CAAGGTGTTG ACCGATTCTG AACAGGTCGG GCAGTGGGGC
GCGCCAACGC TGGACGTCTG GGTGGTGCGC AAAGATTTTG CCGAGAAACA TCCTGAGGTC
GTGAAAGCGT TCGCTAAAAG CGCCATCGAT GCTCAGCAAC CGTACATTGC TAACCCAGAC
GTGTGGCTGA AACAGCCGGA AAACATCAGC AAACTGGCGC GTTTAAGCGG CGTGCCTGAA
GGTGACGTTC CGGGGCTGGT GAAGGGGAAT ACCTATCTGA CGCCGCAGCA ACAAACGGCA
GAACTGACCG GACCGGTGAA CAAAGCGATC ATCGACACCG CGCAGTTTTT GAAAGAGCAG
GGCAAGGTCC CGGCTGTAGC GAATGATTAC AGCCAGTACG TTACCTCGCG CTTCGTGCAA
TAA
 
Protein sequence
MAISSRNTLL AALAFIAFQA QAVNVTVAYQ TSAEPAKVAQ ADNTFAKESG ATVDWRKFDS 
GASIVRALAS GDVQIGNLGS SPLAVAASQQ VPIEVFLLAS KLGNSEALVV KKTISKPEDL
IGKRIAVPFI STTHYSLLAA LKHWGIKPGQ VEIVNLQPPA IIAAWQRGDI DGAYVWAPAV
NALEKDGKVL TDSEQVGQWG APTLDVWVVR KDFAEKHPEV VKAFAKSAID AQQPYIANPD
VWLKQPENIS KLARLSGVPE GDVPGLVKGN TYLTPQQQTA ELTGPVNKAI IDTAQFLKEQ
GKVPAVANDY SQYVTSRFVQ