Gene EcDH1_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3239 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3482309 
End bp3483160 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content54% 
IMG OID 
ProductTaurine dioxygenase 
Protein accessionACX40864 
Protein GI260450442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAC GTCTGAGCAT TACCCCGCTG GGGCCGTATA TCGGCGCACA AATTTCGGGT 
GCCGACCTGA CGCGCCCGTT AAGCGATAAT CAGTTTGAAC AGCTTTACCA TGCGGTGCTG
CGCCATCAGG TGGTGTTTCT ACGCGATCAA GCTATTACGC CGCAGCAGCA ACGCGCGCTG
GCCCAGCGTT TTGGCGAATT GCATATTCAC CCTGTTTACC CGCATGCCGA AGGGGTTGAC
GAGATCATCG TGCTGGATAC CCATAACGAT AATCCGCCAG ATAACGACAA CTGGCATACC
GATGTGACAT TTATTGAAAC GCCACCCGCA GGGGCGATTC TGGCAGCTAA AGAGTTACCT
TCGACCGGCG GTGATACGCT CTGGACCAGC GGTATTGCGG CCTATGAGGC GCTCTCTGTT
CCCTTCCGCC AGCTGCTGAG TGGGCTGCGT GCGGAGCATG ATTTCCGTAA ATCGTTCCCG
GAATACAAAT ACCGCAAAAC CGAGGAGGAA CATCAACGCT GGCGCGAGGC GGTCGCGAAA
AACCCGCCGT TGCTACATCC GGTGGTGCGA ACGCATCCGG TGAGCGGTAA ACAGGCGCTG
TTTGTGAATG AAGGCTTTAC TACGCGAATT GTTGATGTGA GCGAGAAAGA GAGCGAAGCC
TTGTTAAGTT TTTTGTTTGC CCATATCACC AAACCGGAGT TTCAGGTGCG CTGGCGCTGG
CAACCAAATG ATATTGCGAT TTGGGATAAC CGCGTGACCC AGCACTATGC CAATGCCGAT
TACCTGCCAC AGCGACGGAT AATGCATCGG GCGACGATCC TTGGGGATAA ACCGTTTTAT
CGGGCGGGGT AA
 
Protein sequence
MSERLSITPL GPYIGAQISG ADLTRPLSDN QFEQLYHAVL RHQVVFLRDQ AITPQQQRAL 
AQRFGELHIH PVYPHAEGVD EIIVLDTHND NPPDNDNWHT DVTFIETPPA GAILAAKELP
STGGDTLWTS GIAAYEALSV PFRQLLSGLR AEHDFRKSFP EYKYRKTEEE HQRWREAVAK
NPPLLHPVVR THPVSGKQAL FVNEGFTTRI VDVSEKESEA LLSFLFAHIT KPEFQVRWRW
QPNDIAIWDN RVTQHYANAD YLPQRRIMHR ATILGDKPFY RAG