| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3227 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3470032 |
|---|
| End bp | 3471126 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | D-alanine/D-alanine ligase |
|---|
| Protein accession | ACX40853 |
|---|
| Protein GI | 260450431 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC TGCGGGTAGG AATCGTTTTT GGTGGTAAAT CAGCGGAACA TGAAGTGTCT
CTGCAATCGG CAAAAAACAT TGTCGATGCC ATTGATAAAA GTCGCTTCGA CGTTGTGCTG
CTGGGCATTG ATAAACAAGG GCAATGGCAC GTCAGCGATG CCAGCAATTA TCTGCTAAAT
GCAGACGATC CTGCCCATAT TGCGTTGCGC CCTTCGGCGA CCAGCCTTGC GCAGGTGCCA
GGTAAACATG AGCATCAGCT TATCGACGCG CAAAACGGTC AGCCGTTGCC GACGGTGGAT
GTCATTTTCC CGATTGTCCA CGGTACGCTG GGCGAAGATG GTTCCTTGCA GGGAATGCTG
CGGGTCGCCA ATTTACCGTT TGTAGGTTCT GATGTTCTGG CTTCAGCAGC CTGTATGGAC
AAAGATGTCA CCAAACGTCT GCTACGCGAT GCCGGGCTGA ACATTGCGCC ATTTATTACC
CTGACGCGCG CCAATCGTCA CAACATTAGT TTTGCCGAAG TGGAGTCTAA ACTGGGGTTA
CCACTGTTTG TAAAACCGGC TAATCAGGGC TCTTCTGTTG GTGTCAGCAA AGTAACCAGT
GAAGAACAGT ACGCAATTGC CGTCGATCTG GCGTTCGAGT TCGATCATAA AGTGATCGTT
GAGCAAGGGA TCAAAGGTCG TGAGATCGAA TGCGCAGTTC TGGGCAACGA CAATCCGCAA
GCCAGCACCT GTGGAGAGAT CGTACTCACC AGCGATTTCT ATGCCTACGA CACCAAGTAC
ATTGACGAAG ATGGCGCGAA AGTGGTAGTT CCGGCAGCCA TTGCGCCAGA AATCAACGAT
AAGATCCGGG CGATTGCCGT TCAGGCTTAT CAAACGTTGG GATGCGCAGG CATGGCGCGT
GTAGACGTGT TTTTAACCCC AGAGAACGAA GTGGTGATCA ACGAGATCAA CACCCTGCCT
GGCTTCACTA ATATCAGTAT GTATCCGAAG CTGTGGCAAG CCAGCGGTCT GGGTTACACC
GATCTGATCA CACGTTTGAT TGAACTGGCG CTGGAGCGTC ACGCTGCGGA TAACGCATTG
AAAACCACAA TGTAA
|
|---|
| Protein sequence | MEKLRVGIVF GGKSAEHEVS LQSAKNIVDA IDKSRFDVVL LGIDKQGQWH VSDASNYLLN
ADDPAHIALR PSATSLAQVP GKHEHQLIDA QNGQPLPTVD VIFPIVHGTL GEDGSLQGML
RVANLPFVGS DVLASAACMD KDVTKRLLRD AGLNIAPFIT LTRANRHNIS FAEVESKLGL
PLFVKPANQG SSVGVSKVTS EEQYAIAVDL AFEFDHKVIV EQGIKGREIE CAVLGNDNPQ
ASTCGEIVLT SDFYAYDTKY IDEDGAKVVV PAAIAPEIND KIRAIAVQAY QTLGCAGMAR
VDVFLTPENE VVINEINTLP GFTNISMYPK LWQASGLGYT DLITRLIELA LERHAADNAL
KTTM
|
|---|
| |